Protein–RNA interactions for Protein: Q9HAH1

ZNF556, Zinc finger protein 556, humanhuman

Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF556Q9HAH1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF556Q9HAH1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 STK25-204ENST00000405585 1643 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 HTR7P1-202ENST00000624664 4411 ntBASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 RBM17P2-201ENST00000616397 1405 ntBASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ZNF556Q9HAH1 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 AC097381.1-201ENST00000429019 1296 ntBASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ZNF556Q9HAH1 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC18.29■□□□□ 0.52
ZNF556Q9HAH1 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms