Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC23.11■■□□□ 1.29
SH2D4AQ9H788 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 TFP1-202ENST00000475455 1573 ntBASIC23.1■■□□□ 1.29
SH2D4AQ9H788 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 YBX1P10-201ENST00000444752 975 ntBASIC23.1■■□□□ 1.29
SH2D4AQ9H788 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 AC133561.5-201ENST00000635547 218 ntBASIC23.1■■□□□ 1.29
SH2D4AQ9H788 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
SH2D4AQ9H788 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 KRT16P1-201ENST00000399124 1418 ntBASIC23.09■■□□□ 1.29
SH2D4AQ9H788 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 C1QL1P1-201ENST00000568105 661 ntBASIC23.09■■□□□ 1.29
SH2D4AQ9H788 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 AC018553.1-201ENST00000616682 1458 ntBASIC23.09■■□□□ 1.29
SH2D4AQ9H788 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC23.09■■□□□ 1.29
SH2D4AQ9H788 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
SH2D4AQ9H788 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH2D4AQ9H788 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH2D4AQ9H788 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH2D4AQ9H788 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC23.08■■□□□ 1.29
SH2D4AQ9H788 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH2D4AQ9H788 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH2D4AQ9H788 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC23.08■■□□□ 1.29
SH2D4AQ9H788 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
SH2D4AQ9H788 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SH2D4AQ9H788 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SH2D4AQ9H788 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
SH2D4AQ9H788 STK25-204ENST00000405585 1643 ntTSL 2 BASIC23.08■■□□□ 1.28
SH2D4AQ9H788 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.28
SH2D4AQ9H788 PHGDH-210ENST00000641115 1638 ntBASIC23.08■■□□□ 1.28
SH2D4AQ9H788 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 CR392000.1-201ENST00000624770 1228 ntBASIC23.07■■□□□ 1.28
SH2D4AQ9H788 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.07■■□□□ 1.28
SH2D4AQ9H788 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 MMP23A-201ENST00000234610 1017 ntBASIC23.06■■□□□ 1.28
SH2D4AQ9H788 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 FAM210CP-201ENST00000445714 574 ntBASIC23.06■■□□□ 1.28
SH2D4AQ9H788 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC23.06■■□□□ 1.28
SH2D4AQ9H788 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC23.06■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms