Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 AC133681.1-201ENST00000465482 601 ntBASIC23.38■■□□□ 1.33
RNF41Q9H4P4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 AC009237.14-201ENST00000609975 1594 ntBASIC23.38■■□□□ 1.33
RNF41Q9H4P4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC23.38■■□□□ 1.33
RNF41Q9H4P4 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 AC098590.1-201ENST00000468126 897 ntBASIC23.37■■□□□ 1.33
RNF41Q9H4P4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 RPPH1-201ENST00000516869 333 ntBASIC23.37■■□□□ 1.33
RNF41Q9H4P4 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC23.37■■□□□ 1.33
RNF41Q9H4P4 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 GCSHP5-201ENST00000443090 522 ntBASIC23.36■■□□□ 1.33
RNF41Q9H4P4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 AC124016.1-201ENST00000609552 612 ntBASIC23.36■■□□□ 1.33
RNF41Q9H4P4 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 Six3os1_6.1-201ENST00000620790 196 ntBASIC23.36■■□□□ 1.33
RNF41Q9H4P4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 AP006587.1-201ENST00000534129 1502 ntBASIC23.36■■□□□ 1.33
RNF41Q9H4P4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.36■■□□□ 1.33
RNF41Q9H4P4 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF41Q9H4P4 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC23.35■■□□□ 1.33
RNF41Q9H4P4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
RNF41Q9H4P4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
RNF41Q9H4P4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC23.35■■□□□ 1.33
RNF41Q9H4P4 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC23.35■■□□□ 1.33
RNF41Q9H4P4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
RNF41Q9H4P4 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
RNF41Q9H4P4 KRASP1-201ENST00000407852 552 ntBASIC23.35■■□□□ 1.33
RNF41Q9H4P4 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC23.35■■□□□ 1.33
RNF41Q9H4P4 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC23.35■■□□□ 1.33
RNF41Q9H4P4 AC142381.4-202ENST00000563973 229 ntBASIC23.35■■□□□ 1.33
RNF41Q9H4P4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.35■■□□□ 1.33
RNF41Q9H4P4 AL359736.2-201ENST00000621992 437 ntBASIC23.35■■□□□ 1.33
RNF41Q9H4P4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC23.35■■□□□ 1.33
RNF41Q9H4P4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC23.35■■□□□ 1.33
RNF41Q9H4P4 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
RNF41Q9H4P4 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC23.34■■□□□ 1.33
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms