Protein–RNA interactions for Protein: Q9BYR4

KRTAP4-3, Keratin-associated protein 4-3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-3Q9BYR4 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 AC012618.2-201ENST00000428058 849 ntBASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 AL390955.1-201ENST00000428694 934 ntBASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 AF186192.3-201ENST00000583427 947 ntBASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 AC133561.5-201ENST00000635547 218 ntBASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 AL691432.2-201ENST00000607222 2038 ntBASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 LINC01465-201ENST00000408887 1940 ntBASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 AC020907.5-201ENST00000624372 1936 ntBASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
KRTAP4-3Q9BYR4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 AC087499.1-201ENST00000418141 1075 ntBASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 RPS20-210ENST00000523936 899 ntTSL 2 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 AP003071.4-201ENST00000562276 1284 ntBASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC6.73□□□□□ -1.33
KRTAP4-3Q9BYR4 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC6.73□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms