Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF2Q99805 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF2Q99805 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TM9SF2Q99805 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF2Q99805 PGM5P4-201ENST00000421970 445 ntBASIC18.31■□□□□ 0.52
TM9SF2Q99805 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.31■□□□□ 0.52
TM9SF2Q99805 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.31■□□□□ 0.52
TM9SF2Q99805 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
TM9SF2Q99805 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TM9SF2Q99805 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.31■□□□□ 0.52
TM9SF2Q99805 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF2Q99805 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF2Q99805 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF2Q99805 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF2Q99805 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.31■□□□□ 0.52
TM9SF2Q99805 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
TM9SF2Q99805 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF2Q99805 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.31■□□□□ 0.52
TM9SF2Q99805 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF2Q99805 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TM9SF2Q99805 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF2Q99805 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF2Q99805 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF2Q99805 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF2Q99805 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF2Q99805 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF2Q99805 AL158211.5-201ENST00000623583 2518 ntBASIC18.3■□□□□ 0.52
TM9SF2Q99805 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF2Q99805 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF2Q99805 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
TM9SF2Q99805 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TM9SF2Q99805 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TM9SF2Q99805 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.29■□□□□ 0.52
TM9SF2Q99805 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.29■□□□□ 0.52
TM9SF2Q99805 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.29■□□□□ 0.52
TM9SF2Q99805 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TM9SF2Q99805 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.29■□□□□ 0.52
TM9SF2Q99805 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.29■□□□□ 0.52
TM9SF2Q99805 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
TM9SF2Q99805 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.29■□□□□ 0.52
TM9SF2Q99805 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.29■□□□□ 0.52
TM9SF2Q99805 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 AC116562.4-201ENST00000641316 2276 ntBASIC18.29■□□□□ 0.52
TM9SF2Q99805 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
TM9SF2Q99805 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TM9SF2Q99805 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
TM9SF2Q99805 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TM9SF2Q99805 AC138932.1-201ENST00000534164 6830 ntBASIC18.28■□□□□ 0.52
TM9SF2Q99805 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.28■□□□□ 0.52
TM9SF2Q99805 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC18.28■□□□□ 0.52
TM9SF2Q99805 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TM9SF2Q99805 KRT18P29-201ENST00000397031 1267 ntBASIC18.28■□□□□ 0.52
TM9SF2Q99805 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.28■□□□□ 0.52
TM9SF2Q99805 GATS-209ENST00000454084 1030 ntTSL 3 BASIC18.28■□□□□ 0.52
TM9SF2Q99805 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.28■□□□□ 0.52
TM9SF2Q99805 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.28■□□□□ 0.52
TM9SF2Q99805 ITM2C-210ENST00000620962 501 ntBASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms