Protein–RNA interactions for Protein: Q99758

ABCA3, ATP-binding cassette sub-family A member 3, humanhuman

Predictions only

Length 1,704 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3Q99758 AC026396.1-201ENST00000419388 421 ntBASIC26.57■■□□□ 1.84
ABCA3Q99758 TSPY21P-201ENST00000433481 731 ntBASIC26.57■■□□□ 1.84
ABCA3Q99758 TSPY23P-201ENST00000440136 739 ntBASIC26.57■■□□□ 1.84
ABCA3Q99758 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC26.57■■□□□ 1.84
ABCA3Q99758 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ABCA3Q99758 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ABCA3Q99758 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC26.56■■□□□ 1.84
ABCA3Q99758 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
ABCA3Q99758 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC26.56■■□□□ 1.84
ABCA3Q99758 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC26.56■■□□□ 1.84
ABCA3Q99758 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC26.56■■□□□ 1.84
ABCA3Q99758 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
ABCA3Q99758 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA3Q99758 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC26.56■■□□□ 1.84
ABCA3Q99758 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA3Q99758 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA3Q99758 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
ABCA3Q99758 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA3Q99758 AC008040.2-201ENST00000461049 708 ntBASIC26.56■■□□□ 1.84
ABCA3Q99758 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC26.56■■□□□ 1.84
ABCA3Q99758 VPS72-207ENST00000640458 689 ntTSL 5 BASIC26.56■■□□□ 1.84
ABCA3Q99758 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC26.56■■□□□ 1.84
ABCA3Q99758 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA3Q99758 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
ABCA3Q99758 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA3Q99758 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA3Q99758 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
ABCA3Q99758 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA3Q99758 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC26.55■■□□□ 1.84
ABCA3Q99758 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA3Q99758 DAP-202ENST00000432074 1048 ntTSL 2 BASIC26.55■■□□□ 1.84
ABCA3Q99758 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC26.55■■□□□ 1.84
ABCA3Q99758 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC26.55■■□□□ 1.84
ABCA3Q99758 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA3Q99758 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA3Q99758 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA3Q99758 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA3Q99758 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ABCA3Q99758 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC26.55■■□□□ 1.84
ABCA3Q99758 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC26.54■■□□□ 1.84
ABCA3Q99758 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC26.54■■□□□ 1.84
ABCA3Q99758 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA3Q99758 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA3Q99758 AC112907.2-201ENST00000448639 330 ntBASIC26.54■■□□□ 1.84
ABCA3Q99758 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA3Q99758 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC26.54■■□□□ 1.84
ABCA3Q99758 AL121603.2-201ENST00000557373 2117 ntBASIC26.54■■□□□ 1.84
ABCA3Q99758 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC26.54■■□□□ 1.84
ABCA3Q99758 AC011558.1-201ENST00000623459 338 ntBASIC26.54■■□□□ 1.84
ABCA3Q99758 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC26.54■■□□□ 1.84
ABCA3Q99758 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
ABCA3Q99758 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
ABCA3Q99758 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ABCA3Q99758 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC26.54■■□□□ 1.84
ABCA3Q99758 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA3Q99758 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA3Q99758 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC26.53■■□□□ 1.84
ABCA3Q99758 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC26.53■■□□□ 1.84
ABCA3Q99758 AL023803.3-201ENST00000615559 522 ntBASIC26.53■■□□□ 1.84
ABCA3Q99758 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC26.53■■□□□ 1.84
ABCA3Q99758 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC26.53■■□□□ 1.84
ABCA3Q99758 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC26.53■■□□□ 1.84
ABCA3Q99758 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC26.53■■□□□ 1.84
ABCA3Q99758 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC26.53■■□□□ 1.84
ABCA3Q99758 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC26.53■■□□□ 1.84
ABCA3Q99758 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC26.53■■□□□ 1.84
ABCA3Q99758 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC26.53■■□□□ 1.84
ABCA3Q99758 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC26.53■■□□□ 1.84
ABCA3Q99758 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC26.53■■□□□ 1.84
ABCA3Q99758 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA3Q99758 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ABCA3Q99758 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA3Q99758 ECEL1P1-201ENST00000373592 1742 ntBASIC26.52■■□□□ 1.84
ABCA3Q99758 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC26.52■■□□□ 1.84
ABCA3Q99758 AC244015.2-201ENST00000616358 1861 ntBASIC26.52■■□□□ 1.84
ABCA3Q99758 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA3Q99758 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC26.52■■□□□ 1.84
ABCA3Q99758 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA3Q99758 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA3Q99758 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ABCA3Q99758 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC26.51■■□□□ 1.84
ABCA3Q99758 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA3Q99758 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC26.51■■□□□ 1.83
ABCA3Q99758 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA3Q99758 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA3Q99758 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC26.51■■□□□ 1.83
ABCA3Q99758 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC26.51■■□□□ 1.83
ABCA3Q99758 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC26.51■■□□□ 1.83
ABCA3Q99758 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC26.51■■□□□ 1.83
ABCA3Q99758 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA3Q99758 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC26.51■■□□□ 1.83
ABCA3Q99758 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA3Q99758 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA3Q99758 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA3Q99758 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA3Q99758 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC26.51■■□□□ 1.83
ABCA3Q99758 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
ABCA3Q99758 HOMER2P1-201ENST00000455653 964 ntBASIC26.51■■□□□ 1.83
ABCA3Q99758 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC26.51■■□□□ 1.83
ABCA3Q99758 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC26.51■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms