Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSTQ99698 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
LYSTQ99698 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSTQ99698 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSTQ99698 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSTQ99698 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSTQ99698 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
LYSTQ99698 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC13.79□□□□□ -0.2
LYSTQ99698 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.79□□□□□ -0.2
LYSTQ99698 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.79□□□□□ -0.2
LYSTQ99698 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC13.79□□□□□ -0.2
LYSTQ99698 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
LYSTQ99698 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
LYSTQ99698 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC13.79□□□□□ -0.2
LYSTQ99698 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSTQ99698 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSTQ99698 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSTQ99698 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSTQ99698 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC13.78□□□□□ -0.2
LYSTQ99698 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSTQ99698 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSTQ99698 AC083849.1-201ENST00000615227 514 ntBASIC13.78□□□□□ -0.2
LYSTQ99698 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSTQ99698 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
LYSTQ99698 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
LYSTQ99698 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.78□□□□□ -0.2
LYSTQ99698 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSTQ99698 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.78□□□□□ -0.2
LYSTQ99698 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSTQ99698 TSPY5P-201ENST00000426936 936 ntBASIC13.78□□□□□ -0.2
LYSTQ99698 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSTQ99698 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC13.78□□□□□ -0.2
LYSTQ99698 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSTQ99698 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LYSTQ99698 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSTQ99698 FSCN1P1-201ENST00000568912 1481 ntBASIC13.78□□□□□ -0.2
LYSTQ99698 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSTQ99698 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSTQ99698 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
LYSTQ99698 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.78□□□□□ -0.2
LYSTQ99698 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
LYSTQ99698 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.2
LYSTQ99698 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
LYSTQ99698 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC13.77□□□□□ -0.2
LYSTQ99698 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
LYSTQ99698 AC006538.3-201ENST00000612495 578 ntBASIC13.77□□□□□ -0.2
LYSTQ99698 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
LYSTQ99698 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSTQ99698 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSTQ99698 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
LYSTQ99698 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC13.77□□□□□ -0.21
LYSTQ99698 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSTQ99698 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC13.77□□□□□ -0.21
LYSTQ99698 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LYSTQ99698 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSTQ99698 PTBP1P-201ENST00000554374 1601 ntBASIC13.77□□□□□ -0.21
LYSTQ99698 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC13.77□□□□□ -0.21
LYSTQ99698 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC13.77□□□□□ -0.21
LYSTQ99698 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LYSTQ99698 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC13.77□□□□□ -0.21
LYSTQ99698 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC13.77□□□□□ -0.21
LYSTQ99698 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC13.77□□□□□ -0.21
LYSTQ99698 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LYSTQ99698 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 COX11P1-201ENST00000489116 835 ntBASIC13.76□□□□□ -0.21
LYSTQ99698 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSTQ99698 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.76□□□□□ -0.21
LYSTQ99698 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC13.76□□□□□ -0.21
LYSTQ99698 AC069148.1-201ENST00000608741 768 ntBASIC13.76□□□□□ -0.21
LYSTQ99698 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LYSTQ99698 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LYSTQ99698 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC13.76□□□□□ -0.21
LYSTQ99698 EGLN1P1-201ENST00000531623 762 ntBASIC13.76□□□□□ -0.21
LYSTQ99698 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LYSTQ99698 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
LYSTQ99698 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LYSTQ99698 PCED1CP-201ENST00000419887 785 ntBASIC13.76□□□□□ -0.21
LYSTQ99698 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LYSTQ99698 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC13.76□□□□□ -0.21
LYSTQ99698 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LYSTQ99698 KRT8P45-201ENST00000414328 1447 ntBASIC13.76□□□□□ -0.21
LYSTQ99698 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms