Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 KRT18P56-201ENST00000507275 550 ntBASIC20.7■□□□□ 0.9
CDCA3Q99618 KRT126P-201ENST00000549467 1181 ntBASIC20.7■□□□□ 0.9
CDCA3Q99618 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.7■□□□□ 0.9
CDCA3Q99618 AL121603.2-201ENST00000557373 2117 ntBASIC20.7■□□□□ 0.9
CDCA3Q99618 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
CDCA3Q99618 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA3Q99618 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
CDCA3Q99618 AL121956.5-201ENST00000625261 221 ntBASIC20.7■□□□□ 0.9
CDCA3Q99618 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC20.7■□□□□ 0.9
CDCA3Q99618 HLA-A-209ENST00000638375 975 ntBASIC20.7■□□□□ 0.9
CDCA3Q99618 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA3Q99618 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA3Q99618 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.7■□□□□ 0.9
CDCA3Q99618 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA3Q99618 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA3Q99618 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA3Q99618 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA3Q99618 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
CDCA3Q99618 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.7■□□□□ 0.9
CDCA3Q99618 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA3Q99618 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDCA3Q99618 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA3Q99618 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA3Q99618 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA3Q99618 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA3Q99618 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA3Q99618 AC007663.1-201ENST00000438948 1240 ntBASIC20.69■□□□□ 0.9
CDCA3Q99618 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDCA3Q99618 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.69■□□□□ 0.9
CDCA3Q99618 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.69■□□□□ 0.9
CDCA3Q99618 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA3Q99618 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.69■□□□□ 0.9
CDCA3Q99618 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA3Q99618 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA3Q99618 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA3Q99618 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
CDCA3Q99618 AC092338.2-201ENST00000568827 1415 ntBASIC20.69■□□□□ 0.9
CDCA3Q99618 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
CDCA3Q99618 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA3Q99618 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA3Q99618 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA3Q99618 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.68■□□□□ 0.9
CDCA3Q99618 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.68■□□□□ 0.9
CDCA3Q99618 LSR-203ENST00000360798 1963 ntTSL 2 BASIC20.68■□□□□ 0.9
CDCA3Q99618 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA3Q99618 AL024507.2-201ENST00000606070 2574 ntBASIC20.68■□□□□ 0.9
CDCA3Q99618 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA3Q99618 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.68■□□□□ 0.9
CDCA3Q99618 TSPY17P-201ENST00000450329 467 ntBASIC20.68■□□□□ 0.9
CDCA3Q99618 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.68■□□□□ 0.9
CDCA3Q99618 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.68■□□□□ 0.9
CDCA3Q99618 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.68■□□□□ 0.9
CDCA3Q99618 AC141257.4-201ENST00000634557 245 ntBASIC20.68■□□□□ 0.9
CDCA3Q99618 AC136944.6-201ENST00000634818 245 ntBASIC20.68■□□□□ 0.9
CDCA3Q99618 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.68■□□□□ 0.9
CDCA3Q99618 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC20.68■□□□□ 0.9
CDCA3Q99618 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC20.68■□□□□ 0.9
CDCA3Q99618 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA3Q99618 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA3Q99618 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA3Q99618 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA3Q99618 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA3Q99618 AC005229.4-201ENST00000610085 2198 ntBASIC20.68■□□□□ 0.9
CDCA3Q99618 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CDCA3Q99618 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCA3Q99618 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA3Q99618 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
CDCA3Q99618 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCA3Q99618 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA3Q99618 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCA3Q99618 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA3Q99618 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCA3Q99618 HOMER2P1-201ENST00000455653 964 ntBASIC20.67■□□□□ 0.9
CDCA3Q99618 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC20.67■□□□□ 0.9
CDCA3Q99618 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA3Q99618 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.67■□□□□ 0.9
CDCA3Q99618 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.67■□□□□ 0.9
CDCA3Q99618 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.67■□□□□ 0.9
CDCA3Q99618 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.67■□□□□ 0.9
CDCA3Q99618 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA3Q99618 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
CDCA3Q99618 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
CDCA3Q99618 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA3Q99618 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCA3Q99618 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC20.67■□□□□ 0.9
CDCA3Q99618 DPP3P2-201ENST00000416030 1696 ntBASIC20.67■□□□□ 0.9
CDCA3Q99618 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA3Q99618 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CDCA3Q99618 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.67■□□□□ 0.9
CDCA3Q99618 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
CDCA3Q99618 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA3Q99618 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.66■□□□□ 0.9
CDCA3Q99618 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA3Q99618 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.66■□□□□ 0.9
CDCA3Q99618 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA3Q99618 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CDCA3Q99618 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.66■□□□□ 0.9
CDCA3Q99618 COPS8-203ENST00000409334 794 ntTSL 5 BASIC20.66■□□□□ 0.9
CDCA3Q99618 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC20.66■□□□□ 0.9
CDCA3Q99618 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms