Protein–RNA interactions for Protein: Q96PU9

ODF3, Outer dense fiber protein 3, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ODF3Q96PU9 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ODF3Q96PU9 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ODF3Q96PU9 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 BX323043.1-201ENST00000641006 1765 ntBASIC14.62□□□□□ -0.07
ODF3Q96PU9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 GPX1P1-201ENST00000388829 606 ntBASIC14.62□□□□□ -0.07
ODF3Q96PU9 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 PARL-206ENST00000435888 1098 ntTSL 5 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 AL137784.2-201ENST00000607332 1000 ntBASIC14.62□□□□□ -0.07
ODF3Q96PU9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ODF3Q96PU9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC14.62□□□□□ -0.07
ODF3Q96PU9 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 MOK-233ENST00000524214 1539 ntTSL 2 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 SERPINH1P1-201ENST00000419794 1249 ntBASIC14.61□□□□□ -0.07
ODF3Q96PU9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 AC026185.1-201ENST00000445748 174 ntBASIC14.61□□□□□ -0.07
ODF3Q96PU9 AC105036.2-201ENST00000569468 176 ntBASIC14.61□□□□□ -0.07
ODF3Q96PU9 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
ODF3Q96PU9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.61□□□□□ -0.07
ODF3Q96PU9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF3Q96PU9 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
ODF3Q96PU9 GLI3-203ENST00000437480 451 ntTSL 2 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 SERP1-205ENST00000487153 657 ntTSL 4 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ODF3Q96PU9 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ODF3Q96PU9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 AC092437.1-201ENST00000624794 1048 ntBASIC14.6□□□□□ -0.07
ODF3Q96PU9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.6□□□□□ -0.07
ODF3Q96PU9 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
ODF3Q96PU9 AC116351.2-201ENST00000606540 1585 ntBASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms