Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 AC098818.2-201ENST00000564925 2320 ntBASIC14.93□□□□□ -0.02
AP1S3Q96PC3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 AC005082.1-201ENST00000413042 2259 ntBASIC14.93□□□□□ -0.02
AP1S3Q96PC3 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 IGHV3-19-201ENST00000521488 291 ntBASIC14.93□□□□□ -0.02
AP1S3Q96PC3 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 AICDA-202ENST00000537228 667 ntTSL 5 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 AC126544.1-201ENST00000580842 1059 ntBASIC14.93□□□□□ -0.02
AP1S3Q96PC3 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
AP1S3Q96PC3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 AC133561.4-201ENST00000566112 224 ntBASIC14.92□□□□□ -0.02
AP1S3Q96PC3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 MIR4466-201ENST00000606121 54 ntBASIC14.92□□□□□ -0.02
AP1S3Q96PC3 AC005224.4-201ENST00000583262 1652 ntBASIC14.92□□□□□ -0.02
AP1S3Q96PC3 EXOC3-AS1-202ENST00000623673 1663 ntBASIC14.92□□□□□ -0.02
AP1S3Q96PC3 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
AP1S3Q96PC3 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 AP004607.4-201ENST00000530158 1459 ntBASIC14.91□□□□□ -0.02
AP1S3Q96PC3 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
AP1S3Q96PC3 AC092720.2-201ENST00000602388 1665 ntBASIC14.9□□□□□ -0.02
AP1S3Q96PC3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 AC099778.1-201ENST00000568593 1911 ntBASIC14.9□□□□□ -0.02
AP1S3Q96PC3 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
AP1S3Q96PC3 AL356441.2-201ENST00000443009 864 ntBASIC14.9□□□□□ -0.02
AP1S3Q96PC3 AC233992.3-201ENST00000607491 485 ntBASIC14.9□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms