Protein–RNA interactions for Protein: Q96L12

CALR3, Calreticulin-3, humanhuman

Known RBP Predictions only

Length 384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALR3Q96L12 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.92■□□□□ 0.94
CALR3Q96L12 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CALR3Q96L12 CNN2P6-201ENST00000439038 900 ntBASIC20.92■□□□□ 0.94
CALR3Q96L12 DUX4L16-201ENST00000555130 1264 ntBASIC20.92■□□□□ 0.94
CALR3Q96L12 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.92■□□□□ 0.94
CALR3Q96L12 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CALR3Q96L12 AC008694.1-202ENST00000636953 945 ntBASIC20.92■□□□□ 0.94
CALR3Q96L12 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CALR3Q96L12 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.92■□□□□ 0.94
CALR3Q96L12 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
CALR3Q96L12 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CALR3Q96L12 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.92■□□□□ 0.94
CALR3Q96L12 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.92■□□□□ 0.94
CALR3Q96L12 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CALR3Q96L12 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CALR3Q96L12 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.92■□□□□ 0.94
CALR3Q96L12 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.92■□□□□ 0.94
CALR3Q96L12 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CALR3Q96L12 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.92■□□□□ 0.94
CALR3Q96L12 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CALR3Q96L12 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.92■□□□□ 0.94
CALR3Q96L12 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
CALR3Q96L12 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALR3Q96L12 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CALR3Q96L12 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALR3Q96L12 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALR3Q96L12 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALR3Q96L12 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CALR3Q96L12 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALR3Q96L12 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALR3Q96L12 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
CALR3Q96L12 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.91■□□□□ 0.94
CALR3Q96L12 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.91■□□□□ 0.94
CALR3Q96L12 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.91■□□□□ 0.94
CALR3Q96L12 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CALR3Q96L12 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.91■□□□□ 0.94
CALR3Q96L12 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CALR3Q96L12 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CALR3Q96L12 AL589743.5-201ENST00000616611 1050 ntBASIC20.91■□□□□ 0.94
CALR3Q96L12 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
CALR3Q96L12 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.91■□□□□ 0.94
CALR3Q96L12 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CALR3Q96L12 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALR3Q96L12 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CALR3Q96L12 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CALR3Q96L12 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CALR3Q96L12 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.9■□□□□ 0.94
CALR3Q96L12 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CALR3Q96L12 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CALR3Q96L12 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CALR3Q96L12 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CALR3Q96L12 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
CALR3Q96L12 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CALR3Q96L12 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC20.9■□□□□ 0.94
CALR3Q96L12 HES2-205ENST00000487437 968 ntTSL 3 BASIC20.9■□□□□ 0.94
CALR3Q96L12 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CALR3Q96L12 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.9■□□□□ 0.94
CALR3Q96L12 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CALR3Q96L12 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
CALR3Q96L12 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CALR3Q96L12 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.9■□□□□ 0.94
CALR3Q96L12 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CALR3Q96L12 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CALR3Q96L12 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CALR3Q96L12 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
CALR3Q96L12 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.89■□□□□ 0.94
CALR3Q96L12 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CALR3Q96L12 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALR3Q96L12 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
CALR3Q96L12 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALR3Q96L12 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC20.89■□□□□ 0.93
CALR3Q96L12 OR10C1-204ENST00000622521 1039 ntBASIC20.89■□□□□ 0.93
CALR3Q96L12 AC231657.2-201ENST00000624556 255 ntBASIC20.89■□□□□ 0.93
CALR3Q96L12 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CALR3Q96L12 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALR3Q96L12 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CALR3Q96L12 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CALR3Q96L12 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CALR3Q96L12 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALR3Q96L12 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CALR3Q96L12 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALR3Q96L12 AC004408.2-201ENST00000623613 2777 ntBASIC20.89■□□□□ 0.93
CALR3Q96L12 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALR3Q96L12 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CALR3Q96L12 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CALR3Q96L12 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CALR3Q96L12 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CALR3Q96L12 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALR3Q96L12 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CALR3Q96L12 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
CALR3Q96L12 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.88■□□□□ 0.93
CALR3Q96L12 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALR3Q96L12 AC016769.1-201ENST00000409132 1010 ntBASIC20.88■□□□□ 0.93
CALR3Q96L12 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.88■□□□□ 0.93
CALR3Q96L12 C2orf69P4-201ENST00000565394 541 ntBASIC20.88■□□□□ 0.93
CALR3Q96L12 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC20.88■□□□□ 0.93
CALR3Q96L12 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.88■□□□□ 0.93
CALR3Q96L12 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CALR3Q96L12 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CALR3Q96L12 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms