Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
LRRC46Q96FV0 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 REXO1L12P-201ENST00000622156 912 ntBASIC17.79■□□□□ 0.44
LRRC46Q96FV0 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
LRRC46Q96FV0 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 DHDH-203ENST00000522614 776 ntTSL 5 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 LINC01023-201ENST00000606054 436 ntBASIC17.78■□□□□ 0.44
LRRC46Q96FV0 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
LRRC46Q96FV0 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 RARRES2P10-201ENST00000564312 460 ntBASIC17.77■□□□□ 0.44
LRRC46Q96FV0 AC087289.5-201ENST00000586076 3175 ntBASIC17.77■□□□□ 0.44
LRRC46Q96FV0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
LRRC46Q96FV0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC46Q96FV0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC46Q96FV0 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC46Q96FV0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
LRRC46Q96FV0 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
LRRC46Q96FV0 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC46Q96FV0 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
LRRC46Q96FV0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
LRRC46Q96FV0 AL049637.2-201ENST00000641778 930 ntBASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms