Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 AC009237.14-201ENST00000609975 1594 ntBASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 AC066615.1-201ENST00000640911 628 ntBASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 AP006587.1-201ENST00000534129 1502 ntBASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.84■□□□□ 0.77
ECHDC3Q96DC8 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.83■□□□□ 0.77
ECHDC3Q96DC8 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.83■□□□□ 0.76
ECHDC3Q96DC8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
ECHDC3Q96DC8 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ECHDC3Q96DC8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ECHDC3Q96DC8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 YBX1P10-201ENST00000444752 975 ntBASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 KRT16P5-201ENST00000455284 522 ntBASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 USP36-216ENST00000589424 970 ntTSL 5 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ECHDC3Q96DC8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ECHDC3Q96DC8 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms