Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 AC069152.1-201ENST00000438030 544 ntBASIC19.05■□□□□ 0.64
UBE2E3Q969T4 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 AC142086.2-201ENST00000569753 217 ntBASIC19.05■□□□□ 0.64
UBE2E3Q969T4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
UBE2E3Q969T4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 AC092368.3-202ENST00000574180 1591 ntBASIC19.04■□□□□ 0.64
UBE2E3Q969T4 AC060766.5-201ENST00000590539 871 ntBASIC19.04■□□□□ 0.64
UBE2E3Q969T4 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
UBE2E3Q969T4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
UBE2E3Q969T4 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
UBE2E3Q969T4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBE2E3Q969T4 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
UBE2E3Q969T4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.01■□□□□ 0.63
UBE2E3Q969T4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms