Protein–RNA interactions for Protein: Q969K3

RNF34, E3 ubiquitin-protein ligase RNF34, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF34Q969K3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF34Q969K3 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF34Q969K3 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
RNF34Q969K3 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF34Q969K3 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.71■□□□□ 0.91
RNF34Q969K3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
RNF34Q969K3 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC20.71■□□□□ 0.91
RNF34Q969K3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF34Q969K3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF34Q969K3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF34Q969K3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.71■□□□□ 0.91
RNF34Q969K3 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RNF34Q969K3 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RNF34Q969K3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
RNF34Q969K3 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RNF34Q969K3 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
RNF34Q969K3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
RNF34Q969K3 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF34Q969K3 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.7■□□□□ 0.9
RNF34Q969K3 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF34Q969K3 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 AC124283.5-201ENST00000624661 1809 ntBASIC20.7■□□□□ 0.9
RNF34Q969K3 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 POM121L13P-201ENST00000422362 380 ntBASIC20.7■□□□□ 0.9
RNF34Q969K3 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.7■□□□□ 0.9
RNF34Q969K3 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.7■□□□□ 0.9
RNF34Q969K3 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF34Q969K3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 AC099778.1-201ENST00000568593 1911 ntBASIC20.7■□□□□ 0.9
RNF34Q969K3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.7■□□□□ 0.9
RNF34Q969K3 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
RNF34Q969K3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF34Q969K3 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF34Q969K3 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
RNF34Q969K3 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF34Q969K3 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF34Q969K3 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF34Q969K3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF34Q969K3 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF34Q969K3 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF34Q969K3 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.69■□□□□ 0.9
RNF34Q969K3 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.69■□□□□ 0.9
RNF34Q969K3 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
RNF34Q969K3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF34Q969K3 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC20.69■□□□□ 0.9
RNF34Q969K3 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF34Q969K3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
RNF34Q969K3 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RNF34Q969K3 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF34Q969K3 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
RNF34Q969K3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF34Q969K3 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RNF34Q969K3 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF34Q969K3 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RNF34Q969K3 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF34Q969K3 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF34Q969K3 KRT18P29-201ENST00000397031 1267 ntBASIC20.68■□□□□ 0.9
RNF34Q969K3 THEM4-205ENST00000489410 643 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF34Q969K3 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RNF34Q969K3 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.68■□□□□ 0.9
RNF34Q969K3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.68■□□□□ 0.9
RNF34Q969K3 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RNF34Q969K3 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC20.68■□□□□ 0.9
RNF34Q969K3 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF34Q969K3 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF34Q969K3 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
RNF34Q969K3 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF34Q969K3 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF34Q969K3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
RNF34Q969K3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.68■□□□□ 0.9
RNF34Q969K3 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RNF34Q969K3 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF34Q969K3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF34Q969K3 AC112907.3-201ENST00000577781 2400 ntBASIC20.67■□□□□ 0.9
RNF34Q969K3 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF34Q969K3 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF34Q969K3 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF34Q969K3 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF34Q969K3 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF34Q969K3 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.67■□□□□ 0.9
RNF34Q969K3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RNF34Q969K3 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF34Q969K3 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.67■□□□□ 0.9
RNF34Q969K3 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.67■□□□□ 0.9
RNF34Q969K3 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF34Q969K3 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
RNF34Q969K3 TMEM191A-211ENST00000637163 1067 ntBASIC20.67■□□□□ 0.9
RNF34Q969K3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.67■□□□□ 0.9
RNF34Q969K3 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms