Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 TSPY14P-201ENST00000303979 915 ntBASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 CRYGFP-201ENST00000418459 633 ntBASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 LIN28AP1-201ENST00000429574 405 ntBASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC26.05■■□□□ 1.76
RAPGEF4Q8WZA2 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RAPGEF4Q8WZA2 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RAPGEF4Q8WZA2 ECEL1P2-202ENST00000465689 757 ntBASIC26.04■■□□□ 1.76
RAPGEF4Q8WZA2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC26.04■■□□□ 1.76
RAPGEF4Q8WZA2 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RAPGEF4Q8WZA2 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC26.04■■□□□ 1.76
RAPGEF4Q8WZA2 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RAPGEF4Q8WZA2 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC26.04■■□□□ 1.76
RAPGEF4Q8WZA2 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
RAPGEF4Q8WZA2 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
RAPGEF4Q8WZA2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC26.04■■□□□ 1.76
RAPGEF4Q8WZA2 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 ATP5G1P1-201ENST00000448724 379 ntBASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 NTF6B-201ENST00000591913 560 ntBASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 AC092720.2-201ENST00000602388 1665 ntBASIC26.03■■□□□ 1.76
RAPGEF4Q8WZA2 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 BID-203ENST00000399765 1879 ntTSL 2 BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 PHGDH-210ENST00000641115 1638 ntBASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
RAPGEF4Q8WZA2 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC26.01■■□□□ 1.75
RAPGEF4Q8WZA2 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC26.01■■□□□ 1.75
RAPGEF4Q8WZA2 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RAPGEF4Q8WZA2 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC26.01■■□□□ 1.75
RAPGEF4Q8WZA2 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
RAPGEF4Q8WZA2 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC26.01■■□□□ 1.75
RAPGEF4Q8WZA2 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RAPGEF4Q8WZA2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC26.01■■□□□ 1.75
RAPGEF4Q8WZA2 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC26.01■■□□□ 1.75
RAPGEF4Q8WZA2 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC26.01■■□□□ 1.75
RAPGEF4Q8WZA2 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
RAPGEF4Q8WZA2 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
RAPGEF4Q8WZA2 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 LGALS8-AS1-201ENST00000487567 1457 ntBASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC26■■□□□ 1.75
RAPGEF4Q8WZA2 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RAPGEF4Q8WZA2 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC25.99■■□□□ 1.75
RAPGEF4Q8WZA2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC25.99■■□□□ 1.75
RAPGEF4Q8WZA2 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
RAPGEF4Q8WZA2 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC25.99■■□□□ 1.75
RAPGEF4Q8WZA2 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC25.99■■□□□ 1.75
RAPGEF4Q8WZA2 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RAPGEF4Q8WZA2 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
RAPGEF4Q8WZA2 AC128688.1-201ENST00000487626 519 ntBASIC25.99■■□□□ 1.75
RAPGEF4Q8WZA2 AC006011.2-201ENST00000621313 1158 ntBASIC25.99■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms