Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 AC243732.1-201ENST00000612648 864 ntBASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 AC009237.14-201ENST00000609975 1594 ntBASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
TRUB1Q8WWH5 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
TRUB1Q8WWH5 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 AL390961.4-201ENST00000623958 2535 ntBASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 AC091799.1-201ENST00000422823 811 ntBASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 AC091305.1-201ENST00000479476 895 ntBASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 PBX2P1-201ENST00000493219 1291 ntBASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 DUX4L2-201ENST00000561772 1275 ntBASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 AC106739.1-201ENST00000617035 715 ntBASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 DUX4L6-201ENST00000626483 1275 ntBASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 DUX4L1-201ENST00000627662 1275 ntBASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 DUX4L8-201ENST00000629013 1275 ntBASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 DUX4L3-201ENST00000630187 1275 ntBASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 DUX4L7-201ENST00000630678 1275 ntBASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 DUX4L5-201ENST00000630834 1275 ntBASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
TRUB1Q8WWH5 MOK-225ENST00000522867 1883 ntTSL 5 BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 KRT18P20-201ENST00000548986 1279 ntBASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRUB1Q8WWH5 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms