Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 TMEM191A-211ENST00000637163 1067 ntBASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
PCDH19Q8TAB3 PWWP2AP1-201ENST00000429776 2273 ntBASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 AL390719.1-204ENST00000412397 1219 ntBASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 AC006557.6-201ENST00000623071 864 ntBASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 HLA-B-256ENST00000639848 1089 ntBASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
PCDH19Q8TAB3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 AC018553.1-201ENST00000616682 1458 ntBASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.43■□□□□ 0.86
PCDH19Q8TAB3 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 RER1-204ENST00000378518 522 ntTSL 3 BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 AC092368.3-202ENST00000574180 1591 ntBASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 AC116351.2-201ENST00000606540 1585 ntBASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.42■□□□□ 0.86
PCDH19Q8TAB3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 RNA5SP413-201ENST00000516373 109 ntBASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDH19Q8TAB3 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms