Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
DNAAF1Q8NEP3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 AC034268.1-201ENST00000441047 882 ntBASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
DNAAF1Q8NEP3 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 MOK-225ENST00000522867 1883 ntTSL 5 BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
DNAAF1Q8NEP3 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 AL162412.1-201ENST00000567129 965 ntBASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 NTF6G-201ENST00000591094 616 ntBASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.36■□□□□ 0.37
DNAAF1Q8NEP3 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
DNAAF1Q8NEP3 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.4 ms