Protein–RNA interactions for Protein: Q8NE63

HIPK4, Homeodomain-interacting protein kinase 4, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK4Q8NE63 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 FZD10-202ENST00000539839 3282 ntBASIC19.18■□□□□ 0.66
HIPK4Q8NE63 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 AC138907.5-202ENST00000569484 235 ntBASIC19.18■□□□□ 0.66
HIPK4Q8NE63 MIR6084-201ENST00000622012 110 ntBASIC19.18■□□□□ 0.66
HIPK4Q8NE63 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
HIPK4Q8NE63 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
HIPK4Q8NE63 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.17■□□□□ 0.66
HIPK4Q8NE63 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.17■□□□□ 0.66
HIPK4Q8NE63 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HIPK4Q8NE63 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
HIPK4Q8NE63 AC245052.3-201ENST00000450182 901 ntBASIC19.17■□□□□ 0.66
HIPK4Q8NE63 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.17■□□□□ 0.66
HIPK4Q8NE63 AL139246.5-201ENST00000606645 996 ntBASIC19.17■□□□□ 0.66
HIPK4Q8NE63 RARRES2P11-201ENST00000635158 484 ntBASIC19.17■□□□□ 0.66
HIPK4Q8NE63 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HIPK4Q8NE63 Z82202.1-201ENST00000623446 1880 ntBASIC19.17■□□□□ 0.66
HIPK4Q8NE63 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
HIPK4Q8NE63 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIPK4Q8NE63 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIPK4Q8NE63 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
HIPK4Q8NE63 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
HIPK4Q8NE63 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.17■□□□□ 0.66
HIPK4Q8NE63 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 AC142381.2-201ENST00000566120 298 ntBASIC19.16■□□□□ 0.66
HIPK4Q8NE63 AC120498.10-201ENST00000621827 505 ntBASIC19.16■□□□□ 0.66
HIPK4Q8NE63 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
HIPK4Q8NE63 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 RALB-208ENST00000631312 311 ntTSL 5 BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
HIPK4Q8NE63 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
HIPK4Q8NE63 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC19.14■□□□□ 0.66
HIPK4Q8NE63 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 MIR2861-201ENST00000636310 90 ntBASIC19.14■□□□□ 0.65
HIPK4Q8NE63 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
HIPK4Q8NE63 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms