Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CCDC168Q8NDH2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 IFNL4P1-201ENST00000607083 540 ntBASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 NPAP1P7-201ENST00000613027 823 ntBASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 AC127496.7-201ENST00000625110 1798 ntBASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CCDC168Q8NDH2 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 AC004951.3-201ENST00000418645 1148 ntBASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 MFAP1P1-201ENST00000442257 1255 ntBASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 AC008040.2-201ENST00000461049 708 ntBASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 PRSS44-201ENST00000515154 1146 ntBASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 AP006587.1-201ENST00000534129 1502 ntBASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 C1orf229-201ENST00000623686 2258 ntBASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.6■□□□□ 0.25
CCDC168Q8NDH2 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 ATP5G2P1-201ENST00000433580 426 ntBASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 YBX1P10-201ENST00000444752 975 ntBASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 AC011484.1-201ENST00000377652 1995 ntBASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CCDC168Q8NDH2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC16.58■□□□□ 0.25
CCDC168Q8NDH2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC16.58■□□□□ 0.25
CCDC168Q8NDH2 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC168Q8NDH2 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.25
CCDC168Q8NDH2 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC168Q8NDH2 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.58■□□□□ 0.25
CCDC168Q8NDH2 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.58■□□□□ 0.25
CCDC168Q8NDH2 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC168Q8NDH2 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CCDC168Q8NDH2 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC16.58■□□□□ 0.24
CCDC168Q8NDH2 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms