Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCDC197Q8NCU1 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC197Q8NCU1 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC197Q8NCU1 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC197Q8NCU1 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCDC197Q8NCU1 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.64■□□□□ 0.74
CCDC197Q8NCU1 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
CCDC197Q8NCU1 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 AC053503.5-201ENST00000601508 636 ntBASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 RARRES2P11-201ENST00000635158 484 ntBASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 KRT8P36-201ENST00000489121 1440 ntBASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 AC005224.4-201ENST00000583262 1652 ntBASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCDC197Q8NCU1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 AC090164.3-201ENST00000610780 2143 ntBASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 EEF1DP3-203ENST00000566025 782 ntBASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 NOC2LP2-201ENST00000407594 1944 ntBASIC19.63■□□□□ 0.73
CCDC197Q8NCU1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCDC197Q8NCU1 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC197Q8NCU1 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC197Q8NCU1 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CCDC197Q8NCU1 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC197Q8NCU1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC19.61■□□□□ 0.73
CCDC197Q8NCU1 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC197Q8NCU1 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC197Q8NCU1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC197Q8NCU1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CCDC197Q8NCU1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms