Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RETREG2Q8NC44 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RETREG2Q8NC44 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
RETREG2Q8NC44 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
RETREG2Q8NC44 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RETREG2Q8NC44 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
RETREG2Q8NC44 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC22.44■■□□□ 1.18
RETREG2Q8NC44 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC22.44■■□□□ 1.18
RETREG2Q8NC44 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC22.44■■□□□ 1.18
RETREG2Q8NC44 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RETREG2Q8NC44 PRKY-204ENST00000533551 1019 ntBASIC22.44■■□□□ 1.18
RETREG2Q8NC44 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.44■■□□□ 1.18
RETREG2Q8NC44 RARRES2P10-201ENST00000564312 460 ntBASIC22.44■■□□□ 1.18
RETREG2Q8NC44 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RETREG2Q8NC44 AC113410.3-201ENST00000623366 203 ntBASIC22.44■■□□□ 1.18
RETREG2Q8NC44 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.44■■□□□ 1.18
RETREG2Q8NC44 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 AL121603.2-201ENST00000557373 2117 ntBASIC22.43■■□□□ 1.18
RETREG2Q8NC44 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 MOK-233ENST00000524214 1539 ntTSL 2 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC22.43■■□□□ 1.18
RETREG2Q8NC44 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC22.42■■□□□ 1.18
RETREG2Q8NC44 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 AC087499.1-201ENST00000418141 1075 ntBASIC22.41■■□□□ 1.18
RETREG2Q8NC44 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
RETREG2Q8NC44 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC22.4■■□□□ 1.18
RETREG2Q8NC44 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms