Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC18.74■□□□□ 0.59
ARHGEF39Q8N4T4 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 USP36-216ENST00000589424 970 ntTSL 5 BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.73■□□□□ 0.59
ARHGEF39Q8N4T4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 FAM197Y4-202ENST00000622692 608 ntBASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 AC009237.14-201ENST00000609975 1594 ntBASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 AP001271.2-201ENST00000624018 1556 ntBASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.72■□□□□ 0.59
ARHGEF39Q8N4T4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 GOLGA2P11-201ENST00000562660 1621 ntBASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
ARHGEF39Q8N4T4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 KRT16P5-201ENST00000455284 522 ntBASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.7■□□□□ 0.58
ARHGEF39Q8N4T4 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 AP006587.1-201ENST00000534129 1502 ntBASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.69■□□□□ 0.58
ARHGEF39Q8N4T4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms