Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AF186192.3-201ENST00000583427 947 ntBASIC31.09■■■□□ 2.57
VPS8Q8N3P4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC31.09■■■□□ 2.57
VPS8Q8N3P4 AC004264.1-201ENST00000608354 794 ntBASIC31.09■■■□□ 2.57
VPS8Q8N3P4 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
VPS8Q8N3P4 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC31.09■■■□□ 2.57
VPS8Q8N3P4 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
VPS8Q8N3P4 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC31.09■■■□□ 2.57
VPS8Q8N3P4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
VPS8Q8N3P4 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC31.09■■■□□ 2.57
VPS8Q8N3P4 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
VPS8Q8N3P4 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
VPS8Q8N3P4 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC31.09■■■□□ 2.57
VPS8Q8N3P4 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC31.08■■■□□ 2.57
VPS8Q8N3P4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 SNORA78-201ENST00000459373 127 ntBASIC31.08■■■□□ 2.57
VPS8Q8N3P4 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 TMEM179-206ENST00000616017 1645 ntBASIC31.08■■■□□ 2.57
VPS8Q8N3P4 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC31.08■■■□□ 2.57
VPS8Q8N3P4 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC31.07■■■□□ 2.57
VPS8Q8N3P4 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.57
VPS8Q8N3P4 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.57
VPS8Q8N3P4 NIFKP9-201ENST00000419265 221 ntBASIC31.07■■■□□ 2.57
VPS8Q8N3P4 AL353807.1-201ENST00000427475 662 ntBASIC31.07■■■□□ 2.57
VPS8Q8N3P4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC31.07■■■□□ 2.57
VPS8Q8N3P4 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC31.07■■■□□ 2.57
VPS8Q8N3P4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC31.07■■■□□ 2.57
VPS8Q8N3P4 MIR4497-201ENST00000583208 89 ntBASIC31.07■■■□□ 2.57
VPS8Q8N3P4 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC31.07■■■□□ 2.57
VPS8Q8N3P4 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC31.07■■■□□ 2.56
VPS8Q8N3P4 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC31.07■■■□□ 2.56
VPS8Q8N3P4 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
VPS8Q8N3P4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
VPS8Q8N3P4 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
VPS8Q8N3P4 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC31.07■■■□□ 2.56
VPS8Q8N3P4 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
VPS8Q8N3P4 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
VPS8Q8N3P4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
VPS8Q8N3P4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC31.07■■■□□ 2.56
VPS8Q8N3P4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC31.07■■■□□ 2.56
VPS8Q8N3P4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC31.07■■■□□ 2.56
VPS8Q8N3P4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC31.07■■■□□ 2.56
VPS8Q8N3P4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC31.06■■■□□ 2.56
VPS8Q8N3P4 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC31.06■■■□□ 2.56
VPS8Q8N3P4 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC31.06■■■□□ 2.56
VPS8Q8N3P4 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC31.06■■■□□ 2.56
VPS8Q8N3P4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC31.06■■■□□ 2.56
VPS8Q8N3P4 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
VPS8Q8N3P4 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC31.04■■■□□ 2.56
VPS8Q8N3P4 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
VPS8Q8N3P4 PENK-204ENST00000518770 863 ntTSL 2 BASIC31.04■■■□□ 2.56
VPS8Q8N3P4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC31.04■■■□□ 2.56
VPS8Q8N3P4 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
VPS8Q8N3P4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC31.04■■■□□ 2.56
VPS8Q8N3P4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
VPS8Q8N3P4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
VPS8Q8N3P4 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC31.04■■■□□ 2.56
VPS8Q8N3P4 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC31.04■■■□□ 2.56
VPS8Q8N3P4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
VPS8Q8N3P4 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC31.03■■■□□ 2.56
VPS8Q8N3P4 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
VPS8Q8N3P4 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
VPS8Q8N3P4 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
VPS8Q8N3P4 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC31.03■■■□□ 2.56
VPS8Q8N3P4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC31.03■■■□□ 2.56
VPS8Q8N3P4 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC31.03■■■□□ 2.56
VPS8Q8N3P4 RPS15-203ENST00000586096 570 ntTSL 2 BASIC31.03■■■□□ 2.56
VPS8Q8N3P4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC31.03■■■□□ 2.56
VPS8Q8N3P4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC31.03■■■□□ 2.56
VPS8Q8N3P4 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC31.02■■■□□ 2.56
VPS8Q8N3P4 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
VPS8Q8N3P4 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
VPS8Q8N3P4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms