Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
SCML4Q8N228 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.64■□□□□ 0.89
SCML4Q8N228 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCML4Q8N228 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
SCML4Q8N228 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCML4Q8N228 AL391422.3-201ENST00000603791 2761 ntBASIC20.63■□□□□ 0.89
SCML4Q8N228 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCML4Q8N228 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SCML4Q8N228 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC20.63■□□□□ 0.89
SCML4Q8N228 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCML4Q8N228 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.63■□□□□ 0.89
SCML4Q8N228 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCML4Q8N228 AL158047.1-201ENST00000445918 881 ntBASIC20.63■□□□□ 0.89
SCML4Q8N228 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC20.63■□□□□ 0.89
SCML4Q8N228 AC004264.1-201ENST00000608354 794 ntBASIC20.63■□□□□ 0.89
SCML4Q8N228 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC20.63■□□□□ 0.89
SCML4Q8N228 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCML4Q8N228 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCML4Q8N228 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SCML4Q8N228 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCML4Q8N228 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCML4Q8N228 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.63■□□□□ 0.89
SCML4Q8N228 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SCML4Q8N228 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SCML4Q8N228 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
SCML4Q8N228 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.63■□□□□ 0.89
SCML4Q8N228 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.63■□□□□ 0.89
SCML4Q8N228 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.63■□□□□ 0.89
SCML4Q8N228 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
SCML4Q8N228 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
SCML4Q8N228 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SCML4Q8N228 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.62■□□□□ 0.89
SCML4Q8N228 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCML4Q8N228 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCML4Q8N228 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC20.62■□□□□ 0.89
SCML4Q8N228 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCML4Q8N228 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.62■□□□□ 0.89
SCML4Q8N228 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCML4Q8N228 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.62■□□□□ 0.89
SCML4Q8N228 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.62■□□□□ 0.89
SCML4Q8N228 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.62■□□□□ 0.89
SCML4Q8N228 FAM197Y4-202ENST00000622692 608 ntBASIC20.62■□□□□ 0.89
SCML4Q8N228 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCML4Q8N228 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SCML4Q8N228 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCML4Q8N228 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SCML4Q8N228 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SCML4Q8N228 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SCML4Q8N228 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SCML4Q8N228 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC20.61■□□□□ 0.89
SCML4Q8N228 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.61■□□□□ 0.89
SCML4Q8N228 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SCML4Q8N228 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.61■□□□□ 0.89
SCML4Q8N228 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
SCML4Q8N228 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.61■□□□□ 0.89
SCML4Q8N228 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.61■□□□□ 0.89
SCML4Q8N228 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
SCML4Q8N228 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
SCML4Q8N228 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.61■□□□□ 0.89
SCML4Q8N228 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SCML4Q8N228 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.61■□□□□ 0.89
SCML4Q8N228 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC20.61■□□□□ 0.89
SCML4Q8N228 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SCML4Q8N228 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCML4Q8N228 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.6■□□□□ 0.89
SCML4Q8N228 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCML4Q8N228 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCML4Q8N228 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCML4Q8N228 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.6■□□□□ 0.89
SCML4Q8N228 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.6■□□□□ 0.89
SCML4Q8N228 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCML4Q8N228 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC20.6■□□□□ 0.89
SCML4Q8N228 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCML4Q8N228 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCML4Q8N228 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.6■□□□□ 0.89
SCML4Q8N228 RARRES2P10-201ENST00000564312 460 ntBASIC20.6■□□□□ 0.89
SCML4Q8N228 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.6■□□□□ 0.89
SCML4Q8N228 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.6■□□□□ 0.89
SCML4Q8N228 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.6■□□□□ 0.89
SCML4Q8N228 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCML4Q8N228 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
SCML4Q8N228 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCML4Q8N228 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
SCML4Q8N228 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCML4Q8N228 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
SCML4Q8N228 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms