Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
BEST3Q8N1M1 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 KRT8P17-201ENST00000453110 1448 ntBASIC18.37■□□□□ 0.53
BEST3Q8N1M1 AL135905.2-201ENST00000584934 1404 ntBASIC18.37■□□□□ 0.53
BEST3Q8N1M1 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
BEST3Q8N1M1 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 NBPF21P-201ENST00000425093 1451 ntBASIC18.36■□□□□ 0.53
BEST3Q8N1M1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
BEST3Q8N1M1 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 RNF165-205ENST00000588679 2904 ntBASIC18.35■□□□□ 0.53
BEST3Q8N1M1 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 TSPY7P-201ENST00000431358 1114 ntBASIC18.35■□□□□ 0.53
BEST3Q8N1M1 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 RARRES2P10-201ENST00000564312 460 ntBASIC18.35■□□□□ 0.53
BEST3Q8N1M1 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 AP001412.1-201ENST00000608405 714 ntBASIC18.35■□□□□ 0.53
BEST3Q8N1M1 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 AL049637.2-201ENST00000641778 930 ntBASIC18.35■□□□□ 0.53
BEST3Q8N1M1 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
BEST3Q8N1M1 AC092720.2-201ENST00000602388 1665 ntBASIC18.34■□□□□ 0.53
BEST3Q8N1M1 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
BEST3Q8N1M1 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms