Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 TUBB8P6-201ENST00000436895 1288 ntBASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 AC128688.1-201ENST00000487626 519 ntBASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.78■□□□□ 0.6
COL27A1Q8IZC6 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 EGLN1P1-201ENST00000531623 762 ntBASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 GRAMD4P8-201ENST00000605465 1115 ntBASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 HMGA1P5-201ENST00000412453 271 ntBASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 CRYGFP-201ENST00000418459 633 ntBASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.77■□□□□ 0.6
COL27A1Q8IZC6 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
COL27A1Q8IZC6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.59
COL27A1Q8IZC6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
COL27A1Q8IZC6 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
COL27A1Q8IZC6 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC18.76■□□□□ 0.59
COL27A1Q8IZC6 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL27A1Q8IZC6 FAM8A6P-201ENST00000407496 1135 ntBASIC18.76■□□□□ 0.59
COL27A1Q8IZC6 Z85996.1-201ENST00000494644 937 ntBASIC18.76■□□□□ 0.59
COL27A1Q8IZC6 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.76■□□□□ 0.59
COL27A1Q8IZC6 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.76■□□□□ 0.59
COL27A1Q8IZC6 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
COL27A1Q8IZC6 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.76■□□□□ 0.59
COL27A1Q8IZC6 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
COL27A1Q8IZC6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.76■□□□□ 0.59
COL27A1Q8IZC6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COL27A1Q8IZC6 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 LIN28AP1-201ENST00000429574 405 ntBASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 AC007663.1-201ENST00000438948 1240 ntBASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 YBX1P2-201ENST00000489612 999 ntBASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 METTL23-204ENST00000586752 904 ntTSL 2 BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COL27A1Q8IZC6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL27A1Q8IZC6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL27A1Q8IZC6 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.74■□□□□ 0.59
COL27A1Q8IZC6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL27A1Q8IZC6 MFAP1P1-201ENST00000442257 1255 ntBASIC18.74■□□□□ 0.59
COL27A1Q8IZC6 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
COL27A1Q8IZC6 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.74■□□□□ 0.59
COL27A1Q8IZC6 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL27A1Q8IZC6 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL27A1Q8IZC6 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
COL27A1Q8IZC6 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC18.74■□□□□ 0.59
COL27A1Q8IZC6 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
COL27A1Q8IZC6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 AL031133.1-201ENST00000406807 723 ntBASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 GLRB-205ENST00000512619 728 ntTSL 3 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 AL138966.2-201ENST00000621997 464 ntBASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 AC131212.4-201ENST00000623606 975 ntBASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 AC007225.1-201ENST00000566331 1836 ntBASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.73■□□□□ 0.59
COL27A1Q8IZC6 AC083849.1-201ENST00000615227 514 ntBASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms