Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 AC133681.1-201ENST00000465482 601 ntBASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
C9orf40Q8IXQ3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 AP001271.2-201ENST00000624018 1556 ntBASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.3■□□□□ 0.52
C9orf40Q8IXQ3 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 FAM197Y4-202ENST00000622692 608 ntBASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
C9orf40Q8IXQ3 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 NBPF21P-201ENST00000425093 1451 ntBASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
C9orf40Q8IXQ3 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf40Q8IXQ3 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
C9orf40Q8IXQ3 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms