Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCUBE3Q8IX30 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
SCUBE3Q8IX30 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCUBE3Q8IX30 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
SCUBE3Q8IX30 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SCUBE3Q8IX30 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCUBE3Q8IX30 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SCUBE3Q8IX30 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 AC018553.1-201ENST00000616682 1458 ntBASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 KRT17P3-201ENST00000420566 1262 ntBASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 AC233263.1-201ENST00000578059 224 ntBASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 AC006058.3-201ENST00000606217 1069 ntBASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
SCUBE3Q8IX30 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCUBE3Q8IX30 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.83■□□□□ 0.93
SCUBE3Q8IX30 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.83■□□□□ 0.93
SCUBE3Q8IX30 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SCUBE3Q8IX30 AFG3L1P-217ENST00000557444 2447 ntBASIC20.83■□□□□ 0.93
SCUBE3Q8IX30 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SCUBE3Q8IX30 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SCUBE3Q8IX30 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
SCUBE3Q8IX30 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SCUBE3Q8IX30 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SCUBE3Q8IX30 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SCUBE3Q8IX30 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SCUBE3Q8IX30 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SCUBE3Q8IX30 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SCUBE3Q8IX30 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 GOLGA2P11-201ENST00000562660 1621 ntBASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
SCUBE3Q8IX30 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 AC116351.2-201ENST00000606540 1585 ntBASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SCUBE3Q8IX30 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SCUBE3Q8IX30 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms