Protein–RNA interactions for Protein: Q6ZNA4

RNF111, E3 ubiquitin-protein ligase Arkadia, humanhuman

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF111Q6ZNA4 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 APTR-203ENST00000430801 583 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RNF111Q6ZNA4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 AL691432.2-201ENST00000607222 2038 ntBASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 CROCCP5-201ENST00000436658 830 ntBASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 AC005332.8-201ENST00000622750 2735 ntBASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
RNF111Q6ZNA4 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 AL049812.1-201ENST00000432563 2267 ntBASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 Z82202.1-201ENST00000623446 1880 ntBASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 AC016405.3-201ENST00000607710 860 ntBASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 FAM21FP-204ENST00000608637 956 ntBASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RNF111Q6ZNA4 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RNF111Q6ZNA4 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RNF111Q6ZNA4 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms