Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHC4Q6S5L8 AC098818.2-201ENST00000564925 2320 ntBASIC22.35■■□□□ 1.17
SHC4Q6S5L8 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
SHC4Q6S5L8 Z82202.1-201ENST00000623446 1880 ntBASIC22.35■■□□□ 1.17
SHC4Q6S5L8 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SHC4Q6S5L8 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHC4Q6S5L8 MIPEPP3-201ENST00000412105 444 ntBASIC22.35■■□□□ 1.17
SHC4Q6S5L8 OR2A1-AS1-201ENST00000462305 773 ntBASIC22.35■■□□□ 1.17
SHC4Q6S5L8 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC22.35■■□□□ 1.17
SHC4Q6S5L8 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC22.35■■□□□ 1.17
SHC4Q6S5L8 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SHC4Q6S5L8 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
SHC4Q6S5L8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC22.35■■□□□ 1.17
SHC4Q6S5L8 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC22.35■■□□□ 1.17
SHC4Q6S5L8 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SHC4Q6S5L8 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC22.35■■□□□ 1.17
SHC4Q6S5L8 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC22.35■■□□□ 1.17
SHC4Q6S5L8 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC22.34■■□□□ 1.17
SHC4Q6S5L8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.33■■□□□ 1.17
SHC4Q6S5L8 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
SHC4Q6S5L8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC22.33■■□□□ 1.17
SHC4Q6S5L8 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
SHC4Q6S5L8 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SHC4Q6S5L8 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
SHC4Q6S5L8 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SHC4Q6S5L8 GUSBP6-202ENST00000438529 1198 ntBASIC22.33■■□□□ 1.17
SHC4Q6S5L8 AC083906.2-201ENST00000511578 360 ntBASIC22.33■■□□□ 1.17
SHC4Q6S5L8 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
SHC4Q6S5L8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.17
SHC4Q6S5L8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
SHC4Q6S5L8 AC018445.3-201ENST00000624177 1945 ntBASIC22.33■■□□□ 1.16
SHC4Q6S5L8 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.16
SHC4Q6S5L8 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC22.32■■□□□ 1.16
SHC4Q6S5L8 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHC4Q6S5L8 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SHC4Q6S5L8 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC22.32■■□□□ 1.16
SHC4Q6S5L8 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SHC4Q6S5L8 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SHC4Q6S5L8 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
SHC4Q6S5L8 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC22.32■■□□□ 1.16
SHC4Q6S5L8 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SHC4Q6S5L8 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC22.32■■□□□ 1.16
SHC4Q6S5L8 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC22.32■■□□□ 1.16
SHC4Q6S5L8 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC22.32■■□□□ 1.16
SHC4Q6S5L8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC22.32■■□□□ 1.16
SHC4Q6S5L8 AC018553.1-201ENST00000616682 1458 ntBASIC22.32■■□□□ 1.16
SHC4Q6S5L8 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SHC4Q6S5L8 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 AC116351.2-201ENST00000606540 1585 ntBASIC22.3■■□□□ 1.16
SHC4Q6S5L8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 NME6-213ENST00000451657 871 ntTSL 2 BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 HES2-206ENST00000489730 730 ntTSL 2 BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC22.3■■□□□ 1.16
SHC4Q6S5L8 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms