Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 AL023803.3-201ENST00000615559 522 ntBASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PTCRAQ6ISU1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 C1orf229-201ENST00000623686 2258 ntBASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 ATP5G2P1-201ENST00000433580 426 ntBASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PTCRAQ6ISU1 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
PTCRAQ6ISU1 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 AL353719.1-201ENST00000566847 864 ntBASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 AC006538.3-201ENST00000612495 578 ntBASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
PTCRAQ6ISU1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 ZNF444P1-201ENST00000559497 298 ntBASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.47■□□□□ 0.87
PTCRAQ6ISU1 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 PTPA-216ENST00000432651 857 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 AC112907.2-201ENST00000448639 330 ntBASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 PRELID1P1-202ENST00000567272 903 ntBASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
PTCRAQ6ISU1 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms