Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
VPS13DQ5THJ4 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS13DQ5THJ4 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13DQ5THJ4 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
VPS13DQ5THJ4 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.41□□□□□ -0.26
VPS13DQ5THJ4 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 TFP1-202ENST00000475455 1573 ntBASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 PLK5-205ENST00000642079 1969 ntBASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 AC007663.1-201ENST00000438948 1240 ntBASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 FAM207BP-201ENST00000447172 505 ntBASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 CD81-212ENST00000526072 1172 ntTSL 5 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 Z98882.1-201ENST00000622160 2253 ntBASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 CD70-202ENST00000423145 881 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 HYMAI.1-201ENST00000620949 238 ntBASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.4□□□□□ -0.26
VPS13DQ5THJ4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.4□□□□□ -0.27
VPS13DQ5THJ4 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 KRT18P38-201ENST00000449496 1282 ntBASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 CD320-202ENST00000537716 1119 ntTSL 2 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 AC005332.1-201ENST00000577698 1310 ntBASIC13.39□□□□□ -0.27
VPS13DQ5THJ4 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 HMGA1P5-201ENST00000412453 271 ntBASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 KRT18P16-201ENST00000510337 1294 ntBASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 PTK2-216ENST00000519881 863 ntTSL 3 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 AC116351.2-201ENST00000606540 1585 ntBASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 AF106564.1-201ENST00000607058 2553 ntBASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 DPP3P2-201ENST00000416030 1696 ntBASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
VPS13DQ5THJ4 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms