Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LINC00242Q5T6M2 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 AC019069.1-201ENST00000610008 1333 ntBASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
LINC00242Q5T6M2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00242Q5T6M2 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00242Q5T6M2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC13.52□□□□□ -0.24
LINC00242Q5T6M2 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00242Q5T6M2 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00242Q5T6M2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
LINC00242Q5T6M2 NEFHP1-201ENST00000412845 2629 ntBASIC13.52□□□□□ -0.24
LINC00242Q5T6M2 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 KRT16P6-202ENST00000425692 1426 ntBASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 KRT8P17-201ENST00000453110 1448 ntBASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 AP001271.2-201ENST00000624018 1556 ntBASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 PTBP1P-201ENST00000554374 1601 ntBASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
LINC00242Q5T6M2 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
LINC00242Q5T6M2 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms