Protein–RNA interactions for Protein: Q5PRF9

SAMD4B, Protein Smaug homolog 2, humanhuman

Known RBP Predictions only

Length 694 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4BQ5PRF9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 IRS3P-201ENST00000223076 1006 ntBASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 AP001160.3-201ENST00000601484 763 ntBASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 AC138932.1-201ENST00000534164 6830 ntBASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SAMD4BQ5PRF9 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 AC097381.1-201ENST00000429019 1296 ntBASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 AC091305.1-201ENST00000479476 895 ntBASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 PBX2P1-201ENST00000493219 1291 ntBASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 KRT18P20-201ENST00000548986 1279 ntBASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 AL356652.1-201ENST00000615962 565 ntBASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 AP001271.2-201ENST00000624018 1556 ntBASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
SAMD4BQ5PRF9 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 MIR939-201ENST00000401314 82 ntBASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 CDV3P1-201ENST00000471403 739 ntBASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 AC026471.1-201ENST00000564629 3026 ntBASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SAMD4BQ5PRF9 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 AC020763.4-201ENST00000623414 4170 ntBASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 AC104187.1-201ENST00000607510 612 ntBASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
SAMD4BQ5PRF9 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms