Protein–RNA interactions for Protein: Q4VXA5

KHDC1, KH homology domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1Q4VXA5 AC004408.2-201ENST00000623613 2777 ntBASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KHDC1Q4VXA5 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KHDC1Q4VXA5 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.02■□□□□ 0.8
KHDC1Q4VXA5 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
KHDC1Q4VXA5 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KHDC1Q4VXA5 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KHDC1Q4VXA5 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.02■□□□□ 0.8
KHDC1Q4VXA5 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC20.02■□□□□ 0.8
KHDC1Q4VXA5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.02■□□□□ 0.8
KHDC1Q4VXA5 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.02■□□□□ 0.8
KHDC1Q4VXA5 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC20.02■□□□□ 0.8
KHDC1Q4VXA5 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KHDC1Q4VXA5 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.79
KHDC1Q4VXA5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.02■□□□□ 0.79
KHDC1Q4VXA5 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KHDC1Q4VXA5 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
KHDC1Q4VXA5 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
KHDC1Q4VXA5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
KHDC1Q4VXA5 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
KHDC1Q4VXA5 AC026471.1-201ENST00000564629 3026 ntBASIC20■□□□□ 0.79
KHDC1Q4VXA5 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KHDC1Q4VXA5 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20■□□□□ 0.79
KHDC1Q4VXA5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KHDC1Q4VXA5 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KHDC1Q4VXA5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20■□□□□ 0.79
KHDC1Q4VXA5 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20■□□□□ 0.79
KHDC1Q4VXA5 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC20■□□□□ 0.79
KHDC1Q4VXA5 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KHDC1Q4VXA5 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC20■□□□□ 0.79
KHDC1Q4VXA5 HES2-205ENST00000487437 968 ntTSL 3 BASIC20■□□□□ 0.79
KHDC1Q4VXA5 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20■□□□□ 0.79
KHDC1Q4VXA5 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
KHDC1Q4VXA5 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20■□□□□ 0.79
KHDC1Q4VXA5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20■□□□□ 0.79
KHDC1Q4VXA5 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
KHDC1Q4VXA5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20■□□□□ 0.79
KHDC1Q4VXA5 TNXA-203ENST00000507684 2038 ntBASIC20■□□□□ 0.79
KHDC1Q4VXA5 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC20■□□□□ 0.79
KHDC1Q4VXA5 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
KHDC1Q4VXA5 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 RNA5SP413-201ENST00000516373 109 ntBASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
KHDC1Q4VXA5 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms