Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CHRFAM7AQ494W8 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 EEF1DP3-203ENST00000566025 782 ntBASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CHRFAM7AQ494W8 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRFAM7AQ494W8 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC17.27■□□□□ 0.35
CHRFAM7AQ494W8 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRFAM7AQ494W8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRFAM7AQ494W8 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRFAM7AQ494W8 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRFAM7AQ494W8 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
CHRFAM7AQ494W8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CHRFAM7AQ494W8 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC17.27■□□□□ 0.35
CHRFAM7AQ494W8 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 AC092720.2-201ENST00000602388 1665 ntBASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 MIR1224-201ENST00000408193 85 ntBASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 FAM197Y4-202ENST00000622692 608 ntBASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 AC010980.2-201ENST00000587099 1412 ntBASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CHRFAM7AQ494W8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 AL162412.1-201ENST00000567129 965 ntBASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 AL591742.1-201ENST00000604433 565 ntBASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 AC073912.3-201ENST00000624414 853 ntBASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CHRFAM7AQ494W8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRFAM7AQ494W8 AC090340.1-201ENST00000620778 4980 ntBASIC17.24■□□□□ 0.35
CHRFAM7AQ494W8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.24■□□□□ 0.35
CHRFAM7AQ494W8 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRFAM7AQ494W8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRFAM7AQ494W8 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRFAM7AQ494W8 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CHRFAM7AQ494W8 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CHRFAM7AQ494W8 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CHRFAM7AQ494W8 LSM12P1-201ENST00000411836 588 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms