Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH1Q08174 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 GGT1-206ENST00000404223 952 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH1Q08174 AC097658.1-201ENST00000475555 843 ntBASIC19.1■□□□□ 0.65
PCDH1Q08174 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH1Q08174 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.1■□□□□ 0.65
PCDH1Q08174 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH1Q08174 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.1■□□□□ 0.65
PCDH1Q08174 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PCDH1Q08174 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH1Q08174 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PCDH1Q08174 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PCDH1Q08174 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.1■□□□□ 0.65
PCDH1Q08174 AC116351.2-201ENST00000606540 1585 ntBASIC19.1■□□□□ 0.65
PCDH1Q08174 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.1■□□□□ 0.65
PCDH1Q08174 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH1Q08174 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
PCDH1Q08174 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH1Q08174 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PCDH1Q08174 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH1Q08174 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH1Q08174 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH1Q08174 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDH1Q08174 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH1Q08174 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.09■□□□□ 0.65
PCDH1Q08174 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH1Q08174 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC19.09■□□□□ 0.65
PCDH1Q08174 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC19.09■□□□□ 0.65
PCDH1Q08174 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH1Q08174 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.09■□□□□ 0.65
PCDH1Q08174 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH1Q08174 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH1Q08174 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
PCDH1Q08174 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDH1Q08174 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDH1Q08174 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH1Q08174 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.08■□□□□ 0.65
PCDH1Q08174 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
PCDH1Q08174 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH1Q08174 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDH1Q08174 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
PCDH1Q08174 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.08■□□□□ 0.65
PCDH1Q08174 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH1Q08174 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH1Q08174 AL390719.1-204ENST00000412397 1219 ntBASIC19.08■□□□□ 0.64
PCDH1Q08174 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.08■□□□□ 0.64
PCDH1Q08174 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDH1Q08174 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDH1Q08174 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH1Q08174 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.08■□□□□ 0.64
PCDH1Q08174 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.08■□□□□ 0.64
PCDH1Q08174 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH1Q08174 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.08■□□□□ 0.64
PCDH1Q08174 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH1Q08174 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH1Q08174 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.08■□□□□ 0.64
PCDH1Q08174 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH1Q08174 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH1Q08174 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH1Q08174 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH1Q08174 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
PCDH1Q08174 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
PCDH1Q08174 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC19.08■□□□□ 0.64
PCDH1Q08174 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH1Q08174 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.07■□□□□ 0.64
PCDH1Q08174 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH1Q08174 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH1Q08174 PCDHAC2-203ENST00000615316 3011 ntBASIC19.07■□□□□ 0.64
PCDH1Q08174 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH1Q08174 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH1Q08174 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH1Q08174 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH1Q08174 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
PCDH1Q08174 GATS-209ENST00000454084 1030 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDH1Q08174 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH1Q08174 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH1Q08174 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.07■□□□□ 0.64
PCDH1Q08174 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC19.07■□□□□ 0.64
PCDH1Q08174 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC19.07■□□□□ 0.64
PCDH1Q08174 AL109923.1-201ENST00000618799 583 ntBASIC19.07■□□□□ 0.64
PCDH1Q08174 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH1Q08174 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
PCDH1Q08174 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PCDH1Q08174 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH1Q08174 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH1Q08174 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.07■□□□□ 0.64
PCDH1Q08174 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.06■□□□□ 0.64
PCDH1Q08174 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms