Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGCS1Q01581 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC19.07■□□□□ 0.64
HMGCS1Q01581 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
HMGCS1Q01581 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS1Q01581 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS1Q01581 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS1Q01581 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
HMGCS1Q01581 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
HMGCS1Q01581 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCS1Q01581 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC19.06■□□□□ 0.64
HMGCS1Q01581 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS1Q01581 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS1Q01581 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS1Q01581 LSM12P1-201ENST00000411836 588 ntBASIC19.06■□□□□ 0.64
HMGCS1Q01581 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCS1Q01581 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.06■□□□□ 0.64
HMGCS1Q01581 AC133552.2-202ENST00000575694 574 ntBASIC19.06■□□□□ 0.64
HMGCS1Q01581 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS1Q01581 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HMGCS1Q01581 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
HMGCS1Q01581 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS1Q01581 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS1Q01581 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
HMGCS1Q01581 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
HMGCS1Q01581 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS1Q01581 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS1Q01581 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS1Q01581 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS1Q01581 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGCS1Q01581 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS1Q01581 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGCS1Q01581 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC19.05■□□□□ 0.64
HMGCS1Q01581 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGCS1Q01581 RAP2CP1-201ENST00000605103 478 ntBASIC19.05■□□□□ 0.64
HMGCS1Q01581 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS1Q01581 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS1Q01581 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
HMGCS1Q01581 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS1Q01581 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS1Q01581 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS1Q01581 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
HMGCS1Q01581 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.05■□□□□ 0.64
HMGCS1Q01581 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.04■□□□□ 0.64
HMGCS1Q01581 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HMGCS1Q01581 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
HMGCS1Q01581 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
HMGCS1Q01581 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.04■□□□□ 0.64
HMGCS1Q01581 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 AC105036.2-201ENST00000569468 176 ntBASIC19.04■□□□□ 0.64
HMGCS1Q01581 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.04■□□□□ 0.64
HMGCS1Q01581 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
HMGCS1Q01581 MKRN4P-201ENST00000444706 1521 ntBASIC19.04■□□□□ 0.64
HMGCS1Q01581 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.04■□□□□ 0.64
HMGCS1Q01581 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
HMGCS1Q01581 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGCS1Q01581 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 MIR663A-201ENST00000385250 93 ntBASIC19.03■□□□□ 0.64
HMGCS1Q01581 AC026185.1-201ENST00000445748 174 ntBASIC19.03■□□□□ 0.64
HMGCS1Q01581 AC023632.3-201ENST00000521633 145 ntBASIC19.03■□□□□ 0.64
HMGCS1Q01581 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.03■□□□□ 0.64
HMGCS1Q01581 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.03■□□□□ 0.64
HMGCS1Q01581 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.03■□□□□ 0.64
HMGCS1Q01581 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.03■□□□□ 0.64
HMGCS1Q01581 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
HMGCS1Q01581 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
HMGCS1Q01581 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS1Q01581 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS1Q01581 AP001271.2-201ENST00000624018 1556 ntBASIC19.02■□□□□ 0.64
HMGCS1Q01581 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS1Q01581 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS1Q01581 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
HMGCS1Q01581 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.02■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms