Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
CBX1P83916 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC20.75■□□□□ 0.91
CBX1P83916 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
CBX1P83916 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
CBX1P83916 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CBX1P83916 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CBX1P83916 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CBX1P83916 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CBX1P83916 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CBX1P83916 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CBX1P83916 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CBX1P83916 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
CBX1P83916 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
CBX1P83916 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.74■□□□□ 0.91
CBX1P83916 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.74■□□□□ 0.91
CBX1P83916 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC20.74■□□□□ 0.91
CBX1P83916 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 SPCS2P3-201ENST00000500401 656 ntBASIC20.74■□□□□ 0.91
CBX1P83916 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.74■□□□□ 0.91
CBX1P83916 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.74■□□□□ 0.91
CBX1P83916 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CBX1P83916 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.73■□□□□ 0.91
CBX1P83916 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.73■□□□□ 0.91
CBX1P83916 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 HTR7P1-202ENST00000624664 4411 ntBASIC20.73■□□□□ 0.91
CBX1P83916 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC20.73■□□□□ 0.91
CBX1P83916 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC20.73■□□□□ 0.91
CBX1P83916 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CBX1P83916 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CBX1P83916 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CBX1P83916 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
CBX1P83916 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.73■□□□□ 0.91
CBX1P83916 AL031602.1-201ENST00000633169 911 ntBASIC20.73■□□□□ 0.91
CBX1P83916 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
CBX1P83916 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
CBX1P83916 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
CBX1P83916 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
CBX1P83916 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC20.73■□□□□ 0.91
CBX1P83916 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
CBX1P83916 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CBX1P83916 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.72■□□□□ 0.91
CBX1P83916 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC20.72■□□□□ 0.91
CBX1P83916 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC20.72■□□□□ 0.91
CBX1P83916 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.72■□□□□ 0.91
CBX1P83916 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
CBX1P83916 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
CBX1P83916 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
CBX1P83916 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.71■□□□□ 0.91
CBX1P83916 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.71■□□□□ 0.91
CBX1P83916 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
CBX1P83916 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CBX1P83916 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
CBX1P83916 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
CBX1P83916 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
CBX1P83916 GPX1-201ENST00000419349 1106 ntBASIC20.71■□□□□ 0.91
CBX1P83916 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CBX1P83916 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
CBX1P83916 RPS2-202ENST00000526522 924 ntTSL 2 BASIC20.71■□□□□ 0.91
CBX1P83916 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.71■□□□□ 0.91
CBX1P83916 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.71■□□□□ 0.91
CBX1P83916 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms