Protein–RNA interactions for Protein: P78395

PRAME, Melanoma antigen preferentially expressed in tumors, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEP78395 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.93■□□□□ 0.78
PRAMEP78395 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRAMEP78395 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRAMEP78395 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PRAMEP78395 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PRAMEP78395 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRAMEP78395 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC19.93■□□□□ 0.78
PRAMEP78395 DUSP5P2-201ENST00000426873 1033 ntBASIC19.93■□□□□ 0.78
PRAMEP78395 TSPY6P-201ENST00000448518 926 ntBASIC19.93■□□□□ 0.78
PRAMEP78395 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC19.93■□□□□ 0.78
PRAMEP78395 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.93■□□□□ 0.78
PRAMEP78395 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.93■□□□□ 0.78
PRAMEP78395 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.93■□□□□ 0.78
PRAMEP78395 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PRAMEP78395 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
PRAMEP78395 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRAMEP78395 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.93■□□□□ 0.78
PRAMEP78395 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PRAMEP78395 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.93■□□□□ 0.78
PRAMEP78395 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
PRAMEP78395 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
PRAMEP78395 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEP78395 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEP78395 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PRAMEP78395 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEP78395 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEP78395 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEP78395 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.92■□□□□ 0.78
PRAMEP78395 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEP78395 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEP78395 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
PRAMEP78395 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC19.92■□□□□ 0.78
PRAMEP78395 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.92■□□□□ 0.78
PRAMEP78395 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PRAMEP78395 SERP1-205ENST00000487153 657 ntTSL 4 BASIC19.92■□□□□ 0.78
PRAMEP78395 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC19.92■□□□□ 0.78
PRAMEP78395 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC19.92■□□□□ 0.78
PRAMEP78395 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC19.92■□□□□ 0.78
PRAMEP78395 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.92■□□□□ 0.78
PRAMEP78395 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
PRAMEP78395 AC092118.2-201ENST00000613495 667 ntBASIC19.92■□□□□ 0.78
PRAMEP78395 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.92■□□□□ 0.78
PRAMEP78395 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.92■□□□□ 0.78
PRAMEP78395 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PRAMEP78395 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PRAMEP78395 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEP78395 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEP78395 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEP78395 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.92■□□□□ 0.78
PRAMEP78395 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
PRAMEP78395 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PRAMEP78395 MOK-233ENST00000524214 1539 ntTSL 2 BASIC19.92■□□□□ 0.78
PRAMEP78395 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
PRAMEP78395 GUSBP6-202ENST00000438529 1198 ntBASIC19.91■□□□□ 0.78
PRAMEP78395 NME6-213ENST00000451657 871 ntTSL 2 BASIC19.91■□□□□ 0.78
PRAMEP78395 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC19.91■□□□□ 0.78
PRAMEP78395 MIR4758-201ENST00000577688 71 ntBASIC19.91■□□□□ 0.78
PRAMEP78395 PFKL-212ENST00000628044 129 ntTSL 3 BASIC19.91■□□□□ 0.78
PRAMEP78395 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.91■□□□□ 0.78
PRAMEP78395 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.91■□□□□ 0.78
PRAMEP78395 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PRAMEP78395 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.91■□□□□ 0.78
PRAMEP78395 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.91■□□□□ 0.78
PRAMEP78395 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEP78395 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.9■□□□□ 0.78
PRAMEP78395 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEP78395 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.9■□□□□ 0.78
PRAMEP78395 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEP78395 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.9■□□□□ 0.78
PRAMEP78395 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PRAMEP78395 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.9■□□□□ 0.78
PRAMEP78395 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEP78395 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.9■□□□□ 0.78
PRAMEP78395 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.9■□□□□ 0.78
PRAMEP78395 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEP78395 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
PRAMEP78395 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PRAMEP78395 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEP78395 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.9■□□□□ 0.78
PRAMEP78395 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.9■□□□□ 0.78
PRAMEP78395 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEP78395 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEP78395 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEP78395 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEP78395 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEP78395 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
PRAMEP78395 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms