Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GABREP78334 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.86■□□□□ 0.61
GABREP78334 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.86■□□□□ 0.61
GABREP78334 ECEL1P2-202ENST00000465689 757 ntBASIC18.86■□□□□ 0.61
GABREP78334 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.86■□□□□ 0.61
GABREP78334 AC026271.3-201ENST00000571884 352 ntBASIC18.86■□□□□ 0.61
GABREP78334 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.86■□□□□ 0.61
GABREP78334 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC18.86■□□□□ 0.61
GABREP78334 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.86■□□□□ 0.61
GABREP78334 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GABREP78334 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GABREP78334 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GABREP78334 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GABREP78334 PTBP1P-201ENST00000554374 1601 ntBASIC18.85■□□□□ 0.61
GABREP78334 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GABREP78334 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GABREP78334 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GABREP78334 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GABREP78334 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.85■□□□□ 0.61
GABREP78334 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GABREP78334 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
GABREP78334 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GABREP78334 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
GABREP78334 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.85■□□□□ 0.61
GABREP78334 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.85■□□□□ 0.61
GABREP78334 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GABREP78334 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
GABREP78334 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.85■□□□□ 0.61
GABREP78334 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
GABREP78334 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
GABREP78334 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GABREP78334 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GABREP78334 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABREP78334 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABREP78334 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
GABREP78334 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABREP78334 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABREP78334 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABREP78334 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GABREP78334 MESTP1-201ENST00000404287 994 ntBASIC18.84■□□□□ 0.61
GABREP78334 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.84■□□□□ 0.61
GABREP78334 EGLN1P1-201ENST00000531623 762 ntBASIC18.84■□□□□ 0.61
GABREP78334 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABREP78334 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
GABREP78334 C1QL1P1-201ENST00000568105 661 ntBASIC18.84■□□□□ 0.61
GABREP78334 AP005242.2-201ENST00000580065 1175 ntBASIC18.84■□□□□ 0.61
GABREP78334 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
GABREP78334 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABREP78334 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABREP78334 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABREP78334 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
GABREP78334 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
GABREP78334 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.83■□□□□ 0.61
GABREP78334 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.83■□□□□ 0.61
GABREP78334 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
GABREP78334 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
GABREP78334 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.83■□□□□ 0.61
GABREP78334 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
GABREP78334 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC18.83■□□□□ 0.6
GABREP78334 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GABREP78334 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GABREP78334 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GABREP78334 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GABREP78334 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
GABREP78334 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
GABREP78334 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.83■□□□□ 0.6
GABREP78334 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.83■□□□□ 0.6
GABREP78334 AC128688.1-201ENST00000487626 519 ntBASIC18.83■□□□□ 0.6
GABREP78334 DGCR10-201ENST00000609839 495 ntBASIC18.83■□□□□ 0.6
GABREP78334 AL445675.2-201ENST00000620291 557 ntBASIC18.83■□□□□ 0.6
GABREP78334 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
GABREP78334 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
GABREP78334 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GABREP78334 AP006587.1-201ENST00000534129 1502 ntBASIC18.83■□□□□ 0.6
GABREP78334 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.83■□□□□ 0.6
GABREP78334 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC18.83■□□□□ 0.6
GABREP78334 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
GABREP78334 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.83■□□□□ 0.6
GABREP78334 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABREP78334 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GABREP78334 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABREP78334 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABREP78334 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABREP78334 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
GABREP78334 TSPY14P-201ENST00000303979 915 ntBASIC18.82■□□□□ 0.6
GABREP78334 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC18.82■□□□□ 0.6
GABREP78334 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABREP78334 AK4P3-201ENST00000418260 669 ntBASIC18.82■□□□□ 0.6
GABREP78334 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.82■□□□□ 0.6
GABREP78334 B3GAT3P1-201ENST00000471720 806 ntBASIC18.82■□□□□ 0.6
GABREP78334 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC18.82■□□□□ 0.6
GABREP78334 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.82■□□□□ 0.6
GABREP78334 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC18.82■□□□□ 0.6
GABREP78334 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.82■□□□□ 0.6
GABREP78334 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.82■□□□□ 0.6
GABREP78334 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
GABREP78334 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABREP78334 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABREP78334 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
GABREP78334 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms