Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4XP62701 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.88■□□□□ 0.45
RPS4XP62701 HES2-205ENST00000487437 968 ntTSL 3 BASIC17.88■□□□□ 0.45
RPS4XP62701 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.88■□□□□ 0.45
RPS4XP62701 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4XP62701 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.88■□□□□ 0.45
RPS4XP62701 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4XP62701 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
RPS4XP62701 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4XP62701 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
RPS4XP62701 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.88■□□□□ 0.45
RPS4XP62701 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC17.88■□□□□ 0.45
RPS4XP62701 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
RPS4XP62701 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.87■□□□□ 0.45
RPS4XP62701 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4XP62701 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RPS4XP62701 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.87■□□□□ 0.45
RPS4XP62701 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.87■□□□□ 0.45
RPS4XP62701 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4XP62701 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.87■□□□□ 0.45
RPS4XP62701 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC17.87■□□□□ 0.45
RPS4XP62701 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.87■□□□□ 0.45
RPS4XP62701 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.87■□□□□ 0.45
RPS4XP62701 AC008687.6-201ENST00000596318 630 ntBASIC17.87■□□□□ 0.45
RPS4XP62701 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.87■□□□□ 0.45
RPS4XP62701 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC17.87■□□□□ 0.45
RPS4XP62701 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4XP62701 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
RPS4XP62701 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4XP62701 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4XP62701 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.87■□□□□ 0.45
RPS4XP62701 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
RPS4XP62701 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
RPS4XP62701 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.86■□□□□ 0.45
RPS4XP62701 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
RPS4XP62701 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 SERPINH1P1-201ENST00000419794 1249 ntBASIC17.86■□□□□ 0.45
RPS4XP62701 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC17.86■□□□□ 0.45
RPS4XP62701 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.86■□□□□ 0.45
RPS4XP62701 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC17.86■□□□□ 0.45
RPS4XP62701 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.86■□□□□ 0.45
RPS4XP62701 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.86■□□□□ 0.45
RPS4XP62701 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
RPS4XP62701 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 NXN-202ENST00000537628 1340 ntTSL 3 BASIC17.86■□□□□ 0.45
RPS4XP62701 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC17.86■□□□□ 0.45
RPS4XP62701 PHGDH-210ENST00000641115 1638 ntBASIC17.86■□□□□ 0.45
RPS4XP62701 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.86■□□□□ 0.45
RPS4XP62701 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.86■□□□□ 0.45
RPS4XP62701 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
RPS4XP62701 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.86■□□□□ 0.45
RPS4XP62701 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
RPS4XP62701 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
RPS4XP62701 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RPS4XP62701 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
RPS4XP62701 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.85■□□□□ 0.45
RPS4XP62701 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.85■□□□□ 0.45
RPS4XP62701 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.85■□□□□ 0.45
RPS4XP62701 PWWP2AP1-201ENST00000429776 2273 ntBASIC17.85■□□□□ 0.45
RPS4XP62701 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.85■□□□□ 0.45
RPS4XP62701 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.85■□□□□ 0.45
RPS4XP62701 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC17.85■□□□□ 0.45
RPS4XP62701 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
RPS4XP62701 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.85■□□□□ 0.45
RPS4XP62701 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.85■□□□□ 0.45
RPS4XP62701 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.85■□□□□ 0.45
RPS4XP62701 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC17.85■□□□□ 0.45
RPS4XP62701 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 AC083880.1-201ENST00000608266 535 ntBASIC17.85■□□□□ 0.45
RPS4XP62701 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
RPS4XP62701 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
RPS4XP62701 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.85■□□□□ 0.45
RPS4XP62701 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms