Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LSM6P62312 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.4■□□□□ 0.38
LSM6P62312 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
LSM6P62312 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.4■□□□□ 0.38
LSM6P62312 MYC-209ENST00000641252 345 ntBASIC17.4■□□□□ 0.38
LSM6P62312 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.4■□□□□ 0.38
LSM6P62312 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.4■□□□□ 0.38
LSM6P62312 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
LSM6P62312 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
LSM6P62312 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSM6P62312 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSM6P62312 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LSM6P62312 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSM6P62312 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSM6P62312 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC17.39■□□□□ 0.37
LSM6P62312 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.39■□□□□ 0.37
LSM6P62312 RER1-204ENST00000378518 522 ntTSL 3 BASIC17.39■□□□□ 0.37
LSM6P62312 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.39■□□□□ 0.37
LSM6P62312 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC17.39■□□□□ 0.37
LSM6P62312 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSM6P62312 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
LSM6P62312 BET1L-207ENST00000529614 560 ntTSL 5 BASIC17.39■□□□□ 0.37
LSM6P62312 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.39■□□□□ 0.37
LSM6P62312 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.39■□□□□ 0.37
LSM6P62312 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
LSM6P62312 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.39■□□□□ 0.37
LSM6P62312 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.39■□□□□ 0.37
LSM6P62312 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSM6P62312 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
LSM6P62312 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSM6P62312 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LSM6P62312 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
LSM6P62312 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC17.38■□□□□ 0.37
LSM6P62312 TREX1-205ENST00000625293 1783 ntBASIC17.38■□□□□ 0.37
LSM6P62312 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LSM6P62312 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LSM6P62312 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
LSM6P62312 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.38■□□□□ 0.37
LSM6P62312 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.38■□□□□ 0.37
LSM6P62312 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSM6P62312 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSM6P62312 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.38■□□□□ 0.37
LSM6P62312 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSM6P62312 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC17.38■□□□□ 0.37
LSM6P62312 AL109923.1-201ENST00000618799 583 ntBASIC17.38■□□□□ 0.37
LSM6P62312 HLA-B-256ENST00000639848 1089 ntBASIC17.38■□□□□ 0.37
LSM6P62312 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
LSM6P62312 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.38■□□□□ 0.37
LSM6P62312 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.38■□□□□ 0.37
LSM6P62312 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSM6P62312 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.38■□□□□ 0.37
LSM6P62312 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
LSM6P62312 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
LSM6P62312 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.38■□□□□ 0.37
LSM6P62312 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LSM6P62312 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSM6P62312 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.37■□□□□ 0.37
LSM6P62312 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
LSM6P62312 AC116351.2-201ENST00000606540 1585 ntBASIC17.37■□□□□ 0.37
LSM6P62312 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LSM6P62312 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.37■□□□□ 0.37
LSM6P62312 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC17.37■□□□□ 0.37
LSM6P62312 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
LSM6P62312 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LSM6P62312 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSM6P62312 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.37■□□□□ 0.37
LSM6P62312 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.37■□□□□ 0.37
LSM6P62312 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.37■□□□□ 0.37
LSM6P62312 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSM6P62312 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.37■□□□□ 0.37
LSM6P62312 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSM6P62312 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
LSM6P62312 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LSM6P62312 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC17.37■□□□□ 0.37
LSM6P62312 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
LSM6P62312 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.37■□□□□ 0.37
LSM6P62312 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
LSM6P62312 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC17.37■□□□□ 0.37
LSM6P62312 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM6P62312 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM6P62312 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM6P62312 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM6P62312 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSM6P62312 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
LSM6P62312 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM6P62312 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM6P62312 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM6P62312 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
LSM6P62312 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
LSM6P62312 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM6P62312 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM6P62312 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.36■□□□□ 0.37
LSM6P62312 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM6P62312 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.36■□□□□ 0.37
LSM6P62312 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms