Protein–RNA interactions for Protein: P55286

CDH8, Cadherin-8, humanhuman

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8P55286 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH8P55286 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH8P55286 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDH8P55286 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.16■□□□□ 0.98
CDH8P55286 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH8P55286 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.16■□□□□ 0.98
CDH8P55286 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC21.16■□□□□ 0.98
CDH8P55286 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21.16■□□□□ 0.98
CDH8P55286 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
CDH8P55286 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
CDH8P55286 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH8P55286 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.16■□□□□ 0.98
CDH8P55286 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH8P55286 Six3os1_6.1-201ENST00000620790 196 ntBASIC21.16■□□□□ 0.98
CDH8P55286 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH8P55286 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH8P55286 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH8P55286 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH8P55286 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH8P55286 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
CDH8P55286 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
CDH8P55286 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.15■□□□□ 0.98
CDH8P55286 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH8P55286 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH8P55286 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH8P55286 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH8P55286 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH8P55286 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.15■□□□□ 0.98
CDH8P55286 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH8P55286 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
CDH8P55286 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH8P55286 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH8P55286 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH8P55286 C1QBPP2-201ENST00000528754 825 ntBASIC21.15■□□□□ 0.98
CDH8P55286 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.15■□□□□ 0.98
CDH8P55286 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH8P55286 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH8P55286 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH8P55286 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CDH8P55286 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH8P55286 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CDH8P55286 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH8P55286 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
CDH8P55286 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH8P55286 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC21.15■□□□□ 0.98
CDH8P55286 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.15■□□□□ 0.98
CDH8P55286 TFP1-202ENST00000475455 1573 ntBASIC21.14■□□□□ 0.98
CDH8P55286 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDH8P55286 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.14■□□□□ 0.98
CDH8P55286 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
CDH8P55286 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CDH8P55286 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC21.14■□□□□ 0.97
CDH8P55286 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CDH8P55286 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH8P55286 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC21.14■□□□□ 0.97
CDH8P55286 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC21.14■□□□□ 0.97
CDH8P55286 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH8P55286 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CDH8P55286 AL121906.2-201ENST00000621597 723 ntBASIC21.14■□□□□ 0.97
CDH8P55286 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.14■□□□□ 0.97
CDH8P55286 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.14■□□□□ 0.97
CDH8P55286 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CDH8P55286 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH8P55286 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH8P55286 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH8P55286 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
CDH8P55286 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.14■□□□□ 0.97
CDH8P55286 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CDH8P55286 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDH8P55286 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDH8P55286 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC21.13■□□□□ 0.97
CDH8P55286 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDH8P55286 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDH8P55286 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CDH8P55286 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CDH8P55286 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH8P55286 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH8P55286 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH8P55286 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.13■□□□□ 0.97
CDH8P55286 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH8P55286 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH8P55286 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC21.13■□□□□ 0.97
CDH8P55286 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CDH8P55286 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC21.13■□□□□ 0.97
CDH8P55286 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CDH8P55286 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC21.13■□□□□ 0.97
CDH8P55286 RPPH1-201ENST00000516869 333 ntBASIC21.13■□□□□ 0.97
CDH8P55286 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.13■□□□□ 0.97
CDH8P55286 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
CDH8P55286 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CDH8P55286 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH8P55286 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.13■□□□□ 0.97
CDH8P55286 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
CDH8P55286 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH8P55286 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CDH8P55286 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH8P55286 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH8P55286 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CDH8P55286 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CDH8P55286 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms