Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1LP55160 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC21.73■■□□□ 1.07
NCKAP1LP55160 AC098590.1-201ENST00000468126 897 ntBASIC21.73■■□□□ 1.07
NCKAP1LP55160 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1LP55160 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.73■■□□□ 1.07
NCKAP1LP55160 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
NCKAP1LP55160 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1LP55160 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.73■■□□□ 1.07
NCKAP1LP55160 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC21.73■■□□□ 1.07
NCKAP1LP55160 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
NCKAP1LP55160 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1LP55160 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.73■■□□□ 1.07
NCKAP1LP55160 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1LP55160 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1LP55160 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1LP55160 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NCKAP1LP55160 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.73■■□□□ 1.07
NCKAP1LP55160 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1LP55160 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1LP55160 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1LP55160 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1LP55160 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC21.72■■□□□ 1.07
NCKAP1LP55160 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.72■■□□□ 1.07
NCKAP1LP55160 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.72■■□□□ 1.07
NCKAP1LP55160 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1LP55160 PRKY-204ENST00000533551 1019 ntBASIC21.72■■□□□ 1.07
NCKAP1LP55160 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1LP55160 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1LP55160 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1LP55160 AL023875.1-201ENST00000640777 796 ntBASIC21.72■■□□□ 1.07
NCKAP1LP55160 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NCKAP1LP55160 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC21.72■■□□□ 1.07
NCKAP1LP55160 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NCKAP1LP55160 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
NCKAP1LP55160 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKAP1LP55160 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC21.71■■□□□ 1.07
NCKAP1LP55160 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.71■■□□□ 1.07
NCKAP1LP55160 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NCKAP1LP55160 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKAP1LP55160 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKAP1LP55160 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NCKAP1LP55160 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NCKAP1LP55160 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC21.71■■□□□ 1.07
NCKAP1LP55160 LY6E-205ENST00000519611 635 ntTSL 3 BASIC21.71■■□□□ 1.07
NCKAP1LP55160 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC21.71■■□□□ 1.07
NCKAP1LP55160 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.71■■□□□ 1.07
NCKAP1LP55160 TMEM191A-211ENST00000637163 1067 ntBASIC21.71■■□□□ 1.07
NCKAP1LP55160 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
NCKAP1LP55160 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC21.71■■□□□ 1.07
NCKAP1LP55160 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
NCKAP1LP55160 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NCKAP1LP55160 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC21.71■■□□□ 1.07
NCKAP1LP55160 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC21.71■■□□□ 1.07
NCKAP1LP55160 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC21.7■■□□□ 1.07
NCKAP1LP55160 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
NCKAP1LP55160 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.7■■□□□ 1.07
NCKAP1LP55160 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1LP55160 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1LP55160 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1LP55160 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1LP55160 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1LP55160 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1LP55160 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1LP55160 AC133681.1-201ENST00000465482 601 ntBASIC21.7■■□□□ 1.06
NCKAP1LP55160 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 C1QBPP2-201ENST00000528754 825 ntBASIC21.7■■□□□ 1.06
NCKAP1LP55160 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 AC124016.1-201ENST00000609552 612 ntBASIC21.7■■□□□ 1.06
NCKAP1LP55160 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1LP55160 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1LP55160 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1LP55160 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
NCKAP1LP55160 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1LP55160 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
NCKAP1LP55160 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKAP1LP55160 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NCKAP1LP55160 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
NCKAP1LP55160 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
NCKAP1LP55160 ISG20-202ENST00000379224 540 ntTSL 3 BASIC21.69■■□□□ 1.06
NCKAP1LP55160 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC21.69■■□□□ 1.06
NCKAP1LP55160 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
NCKAP1LP55160 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC21.69■■□□□ 1.06
NCKAP1LP55160 RPPH1-201ENST00000516869 333 ntBASIC21.69■■□□□ 1.06
NCKAP1LP55160 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC21.69■■□□□ 1.06
NCKAP1LP55160 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.69■■□□□ 1.06
NCKAP1LP55160 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms