Protein–RNA interactions for Protein: P54289

CACNA2D1, Voltage-dependent calcium channel subunit alpha-2/delta-1, humanhuman

Predictions only

Length 1,103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D1P54289 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.99■□□□□ 0.95
CACNA2D1P54289 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA2D1P54289 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA2D1P54289 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CACNA2D1P54289 AC133681.1-201ENST00000465482 601 ntBASIC20.99■□□□□ 0.95
CACNA2D1P54289 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA2D1P54289 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.99■□□□□ 0.95
CACNA2D1P54289 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.99■□□□□ 0.95
CACNA2D1P54289 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.99■□□□□ 0.95
CACNA2D1P54289 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC20.99■□□□□ 0.95
CACNA2D1P54289 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA2D1P54289 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
CACNA2D1P54289 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC20.99■□□□□ 0.95
CACNA2D1P54289 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA2D1P54289 MME-217ENST00000616757 1315 ntTSL 5 BASIC20.99■□□□□ 0.95
CACNA2D1P54289 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
CACNA2D1P54289 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA2D1P54289 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA2D1P54289 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA2D1P54289 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA2D1P54289 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
CACNA2D1P54289 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC20.99■□□□□ 0.95
CACNA2D1P54289 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA2D1P54289 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.98■□□□□ 0.95
CACNA2D1P54289 BX119927.1-201ENST00000636596 1552 ntBASIC20.98■□□□□ 0.95
CACNA2D1P54289 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC20.98■□□□□ 0.95
CACNA2D1P54289 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
CACNA2D1P54289 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA2D1P54289 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA2D1P54289 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.98■□□□□ 0.95
CACNA2D1P54289 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA2D1P54289 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA2D1P54289 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC20.98■□□□□ 0.95
CACNA2D1P54289 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA2D1P54289 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA2D1P54289 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.98■□□□□ 0.95
CACNA2D1P54289 UBE2SP1-201ENST00000450587 669 ntBASIC20.98■□□□□ 0.95
CACNA2D1P54289 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.98■□□□□ 0.95
CACNA2D1P54289 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC20.98■□□□□ 0.95
CACNA2D1P54289 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC20.98■□□□□ 0.95
CACNA2D1P54289 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA2D1P54289 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.98■□□□□ 0.95
CACNA2D1P54289 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA2D1P54289 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
CACNA2D1P54289 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
CACNA2D1P54289 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA2D1P54289 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA2D1P54289 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CACNA2D1P54289 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
CACNA2D1P54289 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA2D1P54289 BAALC-201ENST00000297574 801 ntTSL 3 BASIC20.97■□□□□ 0.95
CACNA2D1P54289 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA2D1P54289 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CACNA2D1P54289 F2R-202ENST00000505600 442 ntTSL 2 BASIC20.97■□□□□ 0.95
CACNA2D1P54289 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC20.97■□□□□ 0.95
CACNA2D1P54289 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
CACNA2D1P54289 AL121906.2-201ENST00000621597 723 ntBASIC20.97■□□□□ 0.95
CACNA2D1P54289 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC20.97■□□□□ 0.95
CACNA2D1P54289 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA2D1P54289 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA2D1P54289 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
CACNA2D1P54289 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CACNA2D1P54289 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC20.97■□□□□ 0.95
CACNA2D1P54289 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.96■□□□□ 0.95
CACNA2D1P54289 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC20.96■□□□□ 0.95
CACNA2D1P54289 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.96■□□□□ 0.95
CACNA2D1P54289 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.96■□□□□ 0.95
CACNA2D1P54289 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.96■□□□□ 0.95
CACNA2D1P54289 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.96■□□□□ 0.95
CACNA2D1P54289 AC008550.1-201ENST00000511500 884 ntBASIC20.96■□□□□ 0.95
CACNA2D1P54289 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
CACNA2D1P54289 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC20.96■□□□□ 0.95
CACNA2D1P54289 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.96■□□□□ 0.95
CACNA2D1P54289 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CACNA2D1P54289 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
CACNA2D1P54289 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.95■□□□□ 0.94
CACNA2D1P54289 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.95■□□□□ 0.94
CACNA2D1P54289 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.95■□□□□ 0.94
CACNA2D1P54289 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.95■□□□□ 0.94
CACNA2D1P54289 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
CACNA2D1P54289 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.95■□□□□ 0.94
CACNA2D1P54289 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CACNA2D1P54289 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC20.95■□□□□ 0.94
CACNA2D1P54289 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC20.95■□□□□ 0.94
CACNA2D1P54289 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms