Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGA2P52926 KRT18P68-201ENST00000392293 1000 ntBASIC18.08■□□□□ 0.48
HMGA2P52926 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGA2P52926 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.08■□□□□ 0.48
HMGA2P52926 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.08■□□□□ 0.48
HMGA2P52926 MFSD11-216ENST00000590393 1141 ntBASIC18.08■□□□□ 0.48
HMGA2P52926 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.08■□□□□ 0.48
HMGA2P52926 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
HMGA2P52926 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGA2P52926 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGA2P52926 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGA2P52926 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGA2P52926 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGA2P52926 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGA2P52926 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGA2P52926 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.08■□□□□ 0.48
HMGA2P52926 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
HMGA2P52926 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HMGA2P52926 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HMGA2P52926 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
HMGA2P52926 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGA2P52926 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
HMGA2P52926 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.07■□□□□ 0.48
HMGA2P52926 AC023632.3-201ENST00000521633 145 ntBASIC18.07■□□□□ 0.48
HMGA2P52926 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.07■□□□□ 0.48
HMGA2P52926 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.07■□□□□ 0.48
HMGA2P52926 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HMGA2P52926 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
HMGA2P52926 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.07■□□□□ 0.48
HMGA2P52926 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGA2P52926 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
HMGA2P52926 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGA2P52926 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGA2P52926 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGA2P52926 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGA2P52926 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
HMGA2P52926 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGA2P52926 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGA2P52926 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.06■□□□□ 0.48
HMGA2P52926 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
HMGA2P52926 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HMGA2P52926 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
HMGA2P52926 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HMGA2P52926 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
HMGA2P52926 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGA2P52926 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.06■□□□□ 0.48
HMGA2P52926 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HMGA2P52926 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
HMGA2P52926 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGA2P52926 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGA2P52926 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGA2P52926 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGA2P52926 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
HMGA2P52926 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGA2P52926 KRT18P11-201ENST00000435214 1283 ntBASIC18.05■□□□□ 0.48
HMGA2P52926 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGA2P52926 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.05■□□□□ 0.48
HMGA2P52926 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.05■□□□□ 0.48
HMGA2P52926 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGA2P52926 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGA2P52926 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGA2P52926 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGA2P52926 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
HMGA2P52926 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
HMGA2P52926 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC18.05■□□□□ 0.48
HMGA2P52926 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.04■□□□□ 0.48
HMGA2P52926 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
HMGA2P52926 CROCCP3-202ENST00000420820 1947 ntBASIC18.04■□□□□ 0.48
HMGA2P52926 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
HMGA2P52926 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.04■□□□□ 0.48
HMGA2P52926 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
HMGA2P52926 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC18.04■□□□□ 0.48
HMGA2P52926 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.04■□□□□ 0.48
HMGA2P52926 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.04■□□□□ 0.48
HMGA2P52926 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms