Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.42■□□□□ 0.7
GTF2A1P52655 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC19.42■□□□□ 0.7
GTF2A1P52655 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
GTF2A1P52655 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
GTF2A1P52655 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GTF2A1P52655 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 MKRN4P-201ENST00000444706 1521 ntBASIC19.41■□□□□ 0.7
GTF2A1P52655 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.41■□□□□ 0.7
GTF2A1P52655 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC19.41■□□□□ 0.7
GTF2A1P52655 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.41■□□□□ 0.7
GTF2A1P52655 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC19.41■□□□□ 0.7
GTF2A1P52655 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.41■□□□□ 0.7
GTF2A1P52655 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
GTF2A1P52655 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC19.41■□□□□ 0.7
GTF2A1P52655 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.41■□□□□ 0.7
GTF2A1P52655 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
GTF2A1P52655 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GTF2A1P52655 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.4■□□□□ 0.7
GTF2A1P52655 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC19.4■□□□□ 0.7
GTF2A1P52655 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC19.4■□□□□ 0.7
GTF2A1P52655 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.4■□□□□ 0.7
GTF2A1P52655 SNX5-217ENST00000606557 1087 ntBASIC19.4■□□□□ 0.7
GTF2A1P52655 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC19.4■□□□□ 0.7
GTF2A1P52655 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
GTF2A1P52655 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
GTF2A1P52655 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
GTF2A1P52655 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC19.4■□□□□ 0.7
GTF2A1P52655 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GTF2A1P52655 LINC01529-204ENST00000636474 1715 ntBASIC19.39■□□□□ 0.7
GTF2A1P52655 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GTF2A1P52655 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
GTF2A1P52655 ANKRD26P3-201ENST00000454044 2748 ntBASIC19.39■□□□□ 0.7
GTF2A1P52655 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
GTF2A1P52655 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
GTF2A1P52655 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.39■□□□□ 0.69
GTF2A1P52655 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.39■□□□□ 0.69
GTF2A1P52655 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC19.39■□□□□ 0.69
GTF2A1P52655 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GTF2A1P52655 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GTF2A1P52655 AC010980.1-201ENST00000587192 1142 ntBASIC19.39■□□□□ 0.69
GTF2A1P52655 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
GTF2A1P52655 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GTF2A1P52655 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.39■□□□□ 0.69
GTF2A1P52655 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.39■□□□□ 0.69
GTF2A1P52655 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
GTF2A1P52655 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
GTF2A1P52655 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC19.39■□□□□ 0.69
GTF2A1P52655 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF2A1P52655 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF2A1P52655 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
GTF2A1P52655 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
GTF2A1P52655 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GTF2A1P52655 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF2A1P52655 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF2A1P52655 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF2A1P52655 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF2A1P52655 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.38■□□□□ 0.69
GTF2A1P52655 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GTF2A1P52655 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF2A1P52655 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
GTF2A1P52655 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.38■□□□□ 0.69
GTF2A1P52655 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
GTF2A1P52655 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
GTF2A1P52655 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
GTF2A1P52655 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
GTF2A1P52655 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms